Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.72□□□□□ -0.37
Ska1Q9CPV1 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ska1Q9CPV1 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.72□□□□□ -0.37
Ska1Q9CPV1 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ska1Q9CPV1 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ska1Q9CPV1 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ska1Q9CPV1 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ska1Q9CPV1 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ska1Q9CPV1 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ska1Q9CPV1 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ska1Q9CPV1 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ska1Q9CPV1 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ska1Q9CPV1 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.72□□□□□ -0.37
Ska1Q9CPV1 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Ska1Q9CPV1 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ska1Q9CPV1 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ska1Q9CPV1 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ska1Q9CPV1 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ska1Q9CPV1 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ska1Q9CPV1 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ska1Q9CPV1 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ska1Q9CPV1 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ska1Q9CPV1 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ska1Q9CPV1 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ska1Q9CPV1 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ska1Q9CPV1 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ska1Q9CPV1 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.71□□□□□ -0.37
Ska1Q9CPV1 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ska1Q9CPV1 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ska1Q9CPV1 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ska1Q9CPV1 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ska1Q9CPV1 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ska1Q9CPV1 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.71□□□□□ -0.37
Ska1Q9CPV1 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.71□□□□□ -0.37
Ska1Q9CPV1 Gm29541-201ENSMUST00000191351 678 ntBASIC12.71□□□□□ -0.37
Ska1Q9CPV1 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ska1Q9CPV1 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.71□□□□□ -0.37
Ska1Q9CPV1 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ska1Q9CPV1 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ska1Q9CPV1 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ska1Q9CPV1 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ska1Q9CPV1 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ska1Q9CPV1 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ska1Q9CPV1 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Ska1Q9CPV1 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ska1Q9CPV1 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ska1Q9CPV1 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ska1Q9CPV1 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Ska1Q9CPV1 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.71□□□□□ -0.38
Ska1Q9CPV1 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ska1Q9CPV1 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ska1Q9CPV1 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ska1Q9CPV1 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ska1Q9CPV1 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ska1Q9CPV1 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ska1Q9CPV1 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ska1Q9CPV1 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.71□□□□□ -0.38
Ska1Q9CPV1 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ska1Q9CPV1 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ska1Q9CPV1 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Gm24543-201ENSMUST00000103867 82 ntBASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Mir449b-201ENSMUST00000104833 80 ntBASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Gm15653-201ENSMUST00000119247 907 ntBASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Gm27702-201ENSMUST00000184512 56 ntBASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Gm16476-201ENSMUST00000221544 139 ntBASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Dupd1-202ENSMUST00000224735 548 ntBASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms