Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Krt88Q9CPR6 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Krt88Q9CPR6 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Krt88Q9CPR6 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Gm9727-201ENSMUST00000161387 555 ntBASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Gm37935-201ENSMUST00000192012 982 ntBASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Gm2213-201ENSMUST00000197485 688 ntBASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Gm18049-201ENSMUST00000208909 581 ntBASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Krt88Q9CPR6 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Krt88Q9CPR6 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Krt88Q9CPR6 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms