Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Gtf2a1Q99PM3 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Gtf2a1Q99PM3 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.67□□□□□ -0.06
Gtf2a1Q99PM3 Gm43075-201ENSMUST00000198613 3905 ntBASIC14.67□□□□□ -0.06
Gtf2a1Q99PM3 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gtf2a1Q99PM3 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gtf2a1Q99PM3 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Gtf2a1Q99PM3 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC14.67□□□□□ -0.06
Gtf2a1Q99PM3 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gtf2a1Q99PM3 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Gm7063-201ENSMUST00000186840 981 ntBASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Gm44826-201ENSMUST00000207648 2332 ntBASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Gm42141-201ENSMUST00000196534 2172 ntBASIC14.66□□□□□ -0.06
Gtf2a1Q99PM3 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 Gm3375-201ENSMUST00000203929 796 ntBASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 Gm7370-201ENSMUST00000219471 767 ntBASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 Slc35b2-207ENSMUST00000226086 850 ntBASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 Gm37931-201ENSMUST00000194686 2866 ntBASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 AC126257.2-201ENSMUST00000215507 2300 ntBASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 Gm45677-201ENSMUST00000209975 1341 ntBASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Gtf2a1Q99PM3 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.07
Gtf2a1Q99PM3 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Gtf2a1Q99PM3 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms