Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Mir698-201ENSMUST00000102164 109 ntBASIC13.18□□□□□ -0.3
Trim8Q99PJ2 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim8Q99PJ2 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Trim8Q99PJ2 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Trim8Q99PJ2 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.18□□□□□ -0.3
Trim8Q99PJ2 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim8Q99PJ2 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.18□□□□□ -0.3
Trim8Q99PJ2 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim8Q99PJ2 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim8Q99PJ2 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.18□□□□□ -0.3
Trim8Q99PJ2 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim8Q99PJ2 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Trim8Q99PJ2 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim8Q99PJ2 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim8Q99PJ2 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim8Q99PJ2 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim8Q99PJ2 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim8Q99PJ2 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim8Q99PJ2 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim8Q99PJ2 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim8Q99PJ2 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim8Q99PJ2 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim8Q99PJ2 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
Trim8Q99PJ2 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim8Q99PJ2 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim8Q99PJ2 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim8Q99PJ2 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.17□□□□□ -0.3
Trim8Q99PJ2 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim8Q99PJ2 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim8Q99PJ2 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim8Q99PJ2 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim8Q99PJ2 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim8Q99PJ2 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim8Q99PJ2 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim8Q99PJ2 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim8Q99PJ2 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim8Q99PJ2 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trim8Q99PJ2 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.17□□□□□ -0.3
Trim8Q99PJ2 Gm5779-201ENSMUST00000218467 910 ntBASIC13.17□□□□□ -0.3
Trim8Q99PJ2 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.17□□□□□ -0.3
Trim8Q99PJ2 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trim8Q99PJ2 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim8Q99PJ2 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim8Q99PJ2 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim8Q99PJ2 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim8Q99PJ2 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim8Q99PJ2 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim8Q99PJ2 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Trim8Q99PJ2 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim8Q99PJ2 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim8Q99PJ2 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim8Q99PJ2 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
Trim8Q99PJ2 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim8Q99PJ2 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim8Q99PJ2 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim8Q99PJ2 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim8Q99PJ2 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Gm24543-201ENSMUST00000103867 82 ntBASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Gm33320-201ENSMUST00000192232 530 ntBASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim8Q99PJ2 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim8Q99PJ2 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.15□□□□□ -0.3
Trim8Q99PJ2 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim8Q99PJ2 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim8Q99PJ2 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms