Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC17.52■□□□□ 0.39
Rtn4Q99P72 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC17.52■□□□□ 0.39
Rtn4Q99P72 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rtn4Q99P72 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Rtn4Q99P72 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rtn4Q99P72 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.39
Rtn4Q99P72 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rtn4Q99P72 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtn4Q99P72 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtn4Q99P72 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rtn4Q99P72 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rtn4Q99P72 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Rtn4Q99P72 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtn4Q99P72 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtn4Q99P72 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtn4Q99P72 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtn4Q99P72 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Rtn4Q99P72 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rtn4Q99P72 Gm20778-201ENSMUST00000178524 627 ntBASIC17.51■□□□□ 0.39
Rtn4Q99P72 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC17.51■□□□□ 0.39
Rtn4Q99P72 Mir6392-201ENSMUST00000184924 108 ntBASIC17.51■□□□□ 0.39
Rtn4Q99P72 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
Rtn4Q99P72 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Rtn4Q99P72 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Rtn4Q99P72 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Rtn4Q99P72 Gm18018-201ENSMUST00000198273 408 ntBASIC17.51■□□□□ 0.39
Rtn4Q99P72 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtn4Q99P72 AC096628.1-201ENSMUST00000226060 641 ntBASIC17.51■□□□□ 0.39
Rtn4Q99P72 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtn4Q99P72 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rtn4Q99P72 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtn4Q99P72 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtn4Q99P72 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtn4Q99P72 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
Rtn4Q99P72 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtn4Q99P72 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtn4Q99P72 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtn4Q99P72 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtn4Q99P72 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rtn4Q99P72 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtn4Q99P72 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtn4Q99P72 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtn4Q99P72 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtn4Q99P72 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Rtn4Q99P72 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtn4Q99P72 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rtn4Q99P72 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rtn4Q99P72 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rtn4Q99P72 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Rtn4Q99P72 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Rtn4Q99P72 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rtn4Q99P72 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rtn4Q99P72 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rtn4Q99P72 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rtn4Q99P72 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.5■□□□□ 0.39
Rtn4Q99P72 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rtn4Q99P72 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Rtn4Q99P72 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Rtn4Q99P72 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Rtn4Q99P72 Gm8089-201ENSMUST00000122463 968 ntBASIC17.5■□□□□ 0.39
Rtn4Q99P72 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
Rtn4Q99P72 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
Rtn4Q99P72 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
Rtn4Q99P72 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Rtn4Q99P72 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rtn4Q99P72 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC17.5■□□□□ 0.39
Rtn4Q99P72 Gm28631-201ENSMUST00000190740 334 ntBASIC17.5■□□□□ 0.39
Rtn4Q99P72 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rtn4Q99P72 Gm34662-202ENSMUST00000220753 603 ntTSL 5 BASIC17.5■□□□□ 0.39
Rtn4Q99P72 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rtn4Q99P72 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC17.5■□□□□ 0.39
Rtn4Q99P72 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rtn4Q99P72 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Rtn4Q99P72 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rtn4Q99P72 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rtn4Q99P72 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.5■□□□□ 0.39
Rtn4Q99P72 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rtn4Q99P72 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Rtn4Q99P72 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rtn4Q99P72 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rtn4Q99P72 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Rtn4Q99P72 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rtn4Q99P72 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rtn4Q99P72 Gm7350-201ENSMUST00000120964 636 ntBASIC17.49■□□□□ 0.39
Rtn4Q99P72 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rtn4Q99P72 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rtn4Q99P72 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC17.49■□□□□ 0.39
Rtn4Q99P72 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC17.49■□□□□ 0.39
Rtn4Q99P72 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC17.49■□□□□ 0.39
Rtn4Q99P72 AC129017.2-201ENSMUST00000226118 1284 ntBASIC17.49■□□□□ 0.39
Rtn4Q99P72 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rtn4Q99P72 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rtn4Q99P72 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rtn4Q99P72 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rtn4Q99P72 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rtn4Q99P72 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Rtn4Q99P72 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rtn4Q99P72 Gm9115-201ENSMUST00000120192 1348 ntBASIC17.48■□□□□ 0.39
Rtn4Q99P72 Gm15163-201ENSMUST00000120749 1302 ntBASIC17.48■□□□□ 0.39
Rtn4Q99P72 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms