Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cdk9Q99J95 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk9Q99J95 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk9Q99J95 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk9Q99J95 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk9Q99J95 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk9Q99J95 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk9Q99J95 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk9Q99J95 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk9Q99J95 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk9Q99J95 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk9Q99J95 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Gm11025-201ENSMUST00000140773 466 ntBASIC13.53□□□□□ -0.24
Cdk9Q99J95 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.53□□□□□ -0.24
Cdk9Q99J95 AA619741-201ENSMUST00000195095 646 ntBASIC13.53□□□□□ -0.24
Cdk9Q99J95 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.53□□□□□ -0.24
Cdk9Q99J95 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.53□□□□□ -0.24
Cdk9Q99J95 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.53□□□□□ -0.24
Cdk9Q99J95 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.53□□□□□ -0.24
Cdk9Q99J95 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cdk9Q99J95 BC001981-202ENSMUST00000191393 1545 ntBASIC13.53□□□□□ -0.24
Cdk9Q99J95 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.53□□□□□ -0.24
Cdk9Q99J95 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.53□□□□□ -0.24
Cdk9Q99J95 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk9Q99J95 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Cdk9Q99J95 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdk9Q99J95 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.24
Cdk9Q99J95 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdk9Q99J95 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdk9Q99J95 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Cdk9Q99J95 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdk9Q99J95 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdk9Q99J95 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cdk9Q99J95 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Cdk9Q99J95 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk9Q99J95 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk9Q99J95 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.52□□□□□ -0.25
Cdk9Q99J95 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.52□□□□□ -0.25
Cdk9Q99J95 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk9Q99J95 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.52□□□□□ -0.25
Cdk9Q99J95 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk9Q99J95 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk9Q99J95 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk9Q99J95 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk9Q99J95 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Cdk9Q99J95 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk9Q99J95 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk9Q99J95 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk9Q99J95 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk9Q99J95 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk9Q99J95 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk9Q99J95 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk9Q99J95 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Cdk9Q99J95 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk9Q99J95 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk9Q99J95 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk9Q99J95 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk9Q99J95 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms