Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.26□□□□□ -0.29
Vsx1Q91V10 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx1Q91V10 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx1Q91V10 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.26□□□□□ -0.29
Vsx1Q91V10 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx1Q91V10 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.26□□□□□ -0.29
Vsx1Q91V10 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.26□□□□□ -0.29
Vsx1Q91V10 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx1Q91V10 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx1Q91V10 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Vsx1Q91V10 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx1Q91V10 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx1Q91V10 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx1Q91V10 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx1Q91V10 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx1Q91V10 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx1Q91V10 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx1Q91V10 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.25□□□□□ -0.29
Vsx1Q91V10 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Vsx1Q91V10 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx1Q91V10 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx1Q91V10 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.25□□□□□ -0.29
Vsx1Q91V10 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx1Q91V10 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx1Q91V10 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.25□□□□□ -0.29
Vsx1Q91V10 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.25□□□□□ -0.29
Vsx1Q91V10 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.25□□□□□ -0.29
Vsx1Q91V10 Gm22902-201ENSMUST00000158488 302 ntBASIC13.25□□□□□ -0.29
Vsx1Q91V10 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.25□□□□□ -0.29
Vsx1Q91V10 Gm27341-201ENSMUST00000183570 106 ntBASIC13.25□□□□□ -0.29
Vsx1Q91V10 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Vsx1Q91V10 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.25□□□□□ -0.29
Vsx1Q91V10 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.25□□□□□ -0.29
Vsx1Q91V10 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx1Q91V10 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Vsx1Q91V10 Gm10146-201ENSMUST00000072739 309 ntBASIC13.25□□□□□ -0.29
Vsx1Q91V10 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.25□□□□□ -0.29
Vsx1Q91V10 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx1Q91V10 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx1Q91V10 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx1Q91V10 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx1Q91V10 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx1Q91V10 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Vsx1Q91V10 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Vsx1Q91V10 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx1Q91V10 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx1Q91V10 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Vsx1Q91V10 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx1Q91V10 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx1Q91V10 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx1Q91V10 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx1Q91V10 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Vsx1Q91V10 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Vsx1Q91V10 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.24□□□□□ -0.29
Vsx1Q91V10 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx1Q91V10 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx1Q91V10 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Vsx1Q91V10 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx1Q91V10 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx1Q91V10 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx1Q91V10 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.24□□□□□ -0.29
Vsx1Q91V10 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.24□□□□□ -0.29
Vsx1Q91V10 Gm20482-202ENSMUST00000174729 825 ntBASIC13.24□□□□□ -0.29
Vsx1Q91V10 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx1Q91V10 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx1Q91V10 Gm37922-201ENSMUST00000195596 455 ntBASIC13.24□□□□□ -0.29
Vsx1Q91V10 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.24□□□□□ -0.29
Vsx1Q91V10 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx1Q91V10 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Vsx1Q91V10 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx1Q91V10 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx1Q91V10 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx1Q91V10 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.24□□□□□ -0.29
Vsx1Q91V10 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx1Q91V10 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx1Q91V10 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx1Q91V10 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx1Q91V10 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
Vsx1Q91V10 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Vsx1Q91V10 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx1Q91V10 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx1Q91V10 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx1Q91V10 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx1Q91V10 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx1Q91V10 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx1Q91V10 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx1Q91V10 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.23□□□□□ -0.29
Vsx1Q91V10 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx1Q91V10 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx1Q91V10 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx1Q91V10 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx1Q91V10 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx1Q91V10 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx1Q91V10 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Vsx1Q91V10 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx1Q91V10 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx1Q91V10 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx1Q91V10 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx1Q91V10 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx1Q91V10 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms