Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ndc1Q8VCB1 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ndc1Q8VCB1 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ndc1Q8VCB1 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ndc1Q8VCB1 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ndc1Q8VCB1 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ndc1Q8VCB1 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ndc1Q8VCB1 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ndc1Q8VCB1 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.68□□□□□ -0.38
Ndc1Q8VCB1 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ndc1Q8VCB1 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ndc1Q8VCB1 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ndc1Q8VCB1 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ndc1Q8VCB1 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ndc1Q8VCB1 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ndc1Q8VCB1 Gm8652-201ENSMUST00000181363 964 ntBASIC12.68□□□□□ -0.38
Ndc1Q8VCB1 Gm2445-201ENSMUST00000182798 989 ntBASIC12.68□□□□□ -0.38
Ndc1Q8VCB1 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ndc1Q8VCB1 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Ndc1Q8VCB1 Gm44397-201ENSMUST00000195950 113 ntBASIC12.68□□□□□ -0.38
Ndc1Q8VCB1 Gm42550-201ENSMUST00000201553 960 ntBASIC12.68□□□□□ -0.38
Ndc1Q8VCB1 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.68□□□□□ -0.38
Ndc1Q8VCB1 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ndc1Q8VCB1 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ndc1Q8VCB1 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ndc1Q8VCB1 Gm5161-201ENSMUST00000075243 853 ntBASIC12.68□□□□□ -0.38
Ndc1Q8VCB1 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ndc1Q8VCB1 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ndc1Q8VCB1 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ndc1Q8VCB1 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ndc1Q8VCB1 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ndc1Q8VCB1 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ndc1Q8VCB1 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ndc1Q8VCB1 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.68□□□□□ -0.38
Ndc1Q8VCB1 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Gm38671-201ENSMUST00000200573 130 ntBASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Gm24447-201ENSMUST00000083977 338 ntBASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ndc1Q8VCB1 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ndc1Q8VCB1 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ndc1Q8VCB1 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Ndc1Q8VCB1 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ndc1Q8VCB1 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ndc1Q8VCB1 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ndc1Q8VCB1 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ndc1Q8VCB1 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.66□□□□□ -0.38
Ndc1Q8VCB1 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ndc1Q8VCB1 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ndc1Q8VCB1 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ndc1Q8VCB1 Gm11814-201ENSMUST00000119515 929 ntBASIC12.66□□□□□ -0.38
Ndc1Q8VCB1 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Ndc1Q8VCB1 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ndc1Q8VCB1 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.66□□□□□ -0.38
Ndc1Q8VCB1 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms