Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup35Q8R4R6 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Nup35Q8R4R6 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Nup35Q8R4R6 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Nup35Q8R4R6 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC10.95□□□□□ -0.66
Nup35Q8R4R6 Gm9824-201ENSMUST00000178707 561 ntBASIC10.95□□□□□ -0.66
Nup35Q8R4R6 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup35Q8R4R6 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup35Q8R4R6 Gm3695-201ENSMUST00000087222 1009 ntBASIC10.95□□□□□ -0.66
Nup35Q8R4R6 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Nup35Q8R4R6 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup35Q8R4R6 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup35Q8R4R6 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Nup35Q8R4R6 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nup35Q8R4R6 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup35Q8R4R6 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup35Q8R4R6 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup35Q8R4R6 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Nup35Q8R4R6 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup35Q8R4R6 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.95□□□□□ -0.66
Nup35Q8R4R6 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Nup35Q8R4R6 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Nup35Q8R4R6 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup35Q8R4R6 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Nup35Q8R4R6 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Gm43273-201ENSMUST00000199649 2594 ntBASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Gm18766-201ENSMUST00000189811 808 ntBASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Gm33320-201ENSMUST00000192232 530 ntBASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Gm45683-201ENSMUST00000210825 1247 ntBASIC10.94□□□□□ -0.66
Nup35Q8R4R6 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Gm16476-201ENSMUST00000221544 139 ntBASIC10.94□□□□□ -0.66
Nup35Q8R4R6 AC131710.1-201ENSMUST00000228336 990 ntBASIC10.94□□□□□ -0.66
Nup35Q8R4R6 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Gm20633-201ENSMUST00000176742 2831 ntBASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup35Q8R4R6 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 AC168058.1-201ENSMUST00000219521 2282 ntBASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms