Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Gm18733-201ENSMUST00000173950 856 ntBASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc58Q8R3Q6 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc58Q8R3Q6 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc58Q8R3Q6 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc58Q8R3Q6 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc58Q8R3Q6 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc58Q8R3Q6 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc58Q8R3Q6 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc58Q8R3Q6 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Ccdc58Q8R3Q6 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc58Q8R3Q6 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.04□□□□□ -0.48
Ccdc58Q8R3Q6 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc58Q8R3Q6 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc58Q8R3Q6 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc58Q8R3Q6 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ccdc58Q8R3Q6 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc58Q8R3Q6 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc58Q8R3Q6 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccdc58Q8R3Q6 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.04□□□□□ -0.48
Ccdc58Q8R3Q6 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc58Q8R3Q6 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccdc58Q8R3Q6 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.04□□□□□ -0.48
Ccdc58Q8R3Q6 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.04□□□□□ -0.48
Ccdc58Q8R3Q6 Gm45453-201ENSMUST00000211758 853 ntBASIC12.04□□□□□ -0.48
Ccdc58Q8R3Q6 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc58Q8R3Q6 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc58Q8R3Q6 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc58Q8R3Q6 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc58Q8R3Q6 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc58Q8R3Q6 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc58Q8R3Q6 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc58Q8R3Q6 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc58Q8R3Q6 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ccdc58Q8R3Q6 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc58Q8R3Q6 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc58Q8R3Q6 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc58Q8R3Q6 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc58Q8R3Q6 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms