Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 AC134335.2-201ENSMUST00000227660 440 ntBASIC17.11■□□□□ 0.33
Chmp7Q8R1T1 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
Chmp7Q8R1T1 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp7Q8R1T1 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp7Q8R1T1 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp7Q8R1T1 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp7Q8R1T1 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Chmp7Q8R1T1 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp7Q8R1T1 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp7Q8R1T1 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp7Q8R1T1 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp7Q8R1T1 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp7Q8R1T1 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp7Q8R1T1 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp7Q8R1T1 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp7Q8R1T1 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp7Q8R1T1 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp7Q8R1T1 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp7Q8R1T1 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp7Q8R1T1 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp7Q8R1T1 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp7Q8R1T1 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC17.1■□□□□ 0.33
Chmp7Q8R1T1 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp7Q8R1T1 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp7Q8R1T1 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp7Q8R1T1 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC17.1■□□□□ 0.33
Chmp7Q8R1T1 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp7Q8R1T1 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp7Q8R1T1 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC17.1■□□□□ 0.33
Chmp7Q8R1T1 Gm4959-201ENSMUST00000197271 1044 ntBASIC17.1■□□□□ 0.33
Chmp7Q8R1T1 Gm44487-201ENSMUST00000205145 325 ntBASIC17.1■□□□□ 0.33
Chmp7Q8R1T1 Gm45865-201ENSMUST00000211815 945 ntBASIC17.1■□□□□ 0.33
Chmp7Q8R1T1 AC022775.2-201ENSMUST00000227885 646 ntBASIC17.1■□□□□ 0.33
Chmp7Q8R1T1 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp7Q8R1T1 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp7Q8R1T1 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Chmp7Q8R1T1 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp7Q8R1T1 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC17.1■□□□□ 0.33
Chmp7Q8R1T1 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp7Q8R1T1 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp7Q8R1T1 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp7Q8R1T1 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp7Q8R1T1 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Chmp7Q8R1T1 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp7Q8R1T1 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp7Q8R1T1 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp7Q8R1T1 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp7Q8R1T1 Gm9431-201ENSMUST00000119765 1051 ntBASIC17.09■□□□□ 0.33
Chmp7Q8R1T1 Gm7809-201ENSMUST00000153199 742 ntBASIC17.09■□□□□ 0.33
Chmp7Q8R1T1 Gm5637-201ENSMUST00000153890 1119 ntBASIC17.09■□□□□ 0.33
Chmp7Q8R1T1 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp7Q8R1T1 Gm28693-202ENSMUST00000190758 331 ntBASIC17.09■□□□□ 0.33
Chmp7Q8R1T1 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp7Q8R1T1 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp7Q8R1T1 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Chmp7Q8R1T1 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp7Q8R1T1 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC17.09■□□□□ 0.33
Chmp7Q8R1T1 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp7Q8R1T1 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp7Q8R1T1 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Chmp7Q8R1T1 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC17.09■□□□□ 0.33
Chmp7Q8R1T1 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp7Q8R1T1 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp7Q8R1T1 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp7Q8R1T1 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp7Q8R1T1 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp7Q8R1T1 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp7Q8R1T1 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp7Q8R1T1 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC17.08■□□□□ 0.33
Chmp7Q8R1T1 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Chmp7Q8R1T1 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp7Q8R1T1 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Chmp7Q8R1T1 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC17.08■□□□□ 0.33
Chmp7Q8R1T1 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp7Q8R1T1 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp7Q8R1T1 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp7Q8R1T1 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Chmp7Q8R1T1 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp7Q8R1T1 Gm8793-201ENSMUST00000183069 1303 ntBASIC17.08■□□□□ 0.32
Chmp7Q8R1T1 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp7Q8R1T1 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp7Q8R1T1 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Chmp7Q8R1T1 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Chmp7Q8R1T1 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Chmp7Q8R1T1 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Chmp7Q8R1T1 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Chmp7Q8R1T1 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Chmp7Q8R1T1 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Chmp7Q8R1T1 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC17.08■□□□□ 0.32
Chmp7Q8R1T1 Gm38158-201ENSMUST00000194617 339 ntBASIC17.08■□□□□ 0.32
Chmp7Q8R1T1 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC17.08■□□□□ 0.32
Chmp7Q8R1T1 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp7Q8R1T1 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC17.08■□□□□ 0.32
Chmp7Q8R1T1 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp7Q8R1T1 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC17.08■□□□□ 0.32
Chmp7Q8R1T1 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Chmp7Q8R1T1 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp7Q8R1T1 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp7Q8R1T1 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp7Q8R1T1 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms