Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.13■□□□□ 0.01
Syne4Q8CII8 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Syne4Q8CII8 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Syne4Q8CII8 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Syne4Q8CII8 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Syne4Q8CII8 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Syne4Q8CII8 Gm10782-202ENSMUST00000223775 1480 ntBASIC15.13■□□□□ 0.01
Syne4Q8CII8 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Syne4Q8CII8 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Syne4Q8CII8 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Syne4Q8CII8 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Syne4Q8CII8 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC15.12■□□□□ 0.01
Syne4Q8CII8 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Syne4Q8CII8 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Syne4Q8CII8 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Syne4Q8CII8 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Syne4Q8CII8 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Syne4Q8CII8 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Syne4Q8CII8 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Syne4Q8CII8 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Syne4Q8CII8 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC15.12■□□□□ 0.01
Syne4Q8CII8 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC15.12■□□□□ 0.01
Syne4Q8CII8 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Syne4Q8CII8 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC15.12■□□□□ 0.01
Syne4Q8CII8 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC15.12■□□□□ 0.01
Syne4Q8CII8 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Syne4Q8CII8 Gm22902-201ENSMUST00000158488 302 ntBASIC15.12■□□□□ 0.01
Syne4Q8CII8 Gm27341-201ENSMUST00000183570 106 ntBASIC15.12■□□□□ 0.01
Syne4Q8CII8 Gm8176-201ENSMUST00000191297 1099 ntBASIC15.12■□□□□ 0.01
Syne4Q8CII8 Gm31256-201ENSMUST00000194705 506 ntBASIC15.12■□□□□ 0.01
Syne4Q8CII8 Gm9445-201ENSMUST00000207454 1285 ntBASIC15.12■□□□□ 0.01
Syne4Q8CII8 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Syne4Q8CII8 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Syne4Q8CII8 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Syne4Q8CII8 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Syne4Q8CII8 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Syne4Q8CII8 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Syne4Q8CII8 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Syne4Q8CII8 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Syne4Q8CII8 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Syne4Q8CII8 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Syne4Q8CII8 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Syne4Q8CII8 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Syne4Q8CII8 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Syne4Q8CII8 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Syne4Q8CII8 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Syne4Q8CII8 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Syne4Q8CII8 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.11■□□□□ 0.01
Syne4Q8CII8 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Syne4Q8CII8 Gm12012-201ENSMUST00000118857 1066 ntBASIC15.11■□□□□ 0.01
Syne4Q8CII8 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Syne4Q8CII8 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC15.11■□□□□ 0.01
Syne4Q8CII8 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC15.11■□□□□ 0.01
Syne4Q8CII8 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC15.11■□□□□ 0.01
Syne4Q8CII8 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Syne4Q8CII8 Gm5869-201ENSMUST00000200248 1257 ntBASIC15.11■□□□□ 0.01
Syne4Q8CII8 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Syne4Q8CII8 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Syne4Q8CII8 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Syne4Q8CII8 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Syne4Q8CII8 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Syne4Q8CII8 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Syne4Q8CII8 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Syne4Q8CII8 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Syne4Q8CII8 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Syne4Q8CII8 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
Syne4Q8CII8 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Syne4Q8CII8 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Syne4Q8CII8 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Syne4Q8CII8 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Syne4Q8CII8 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syne4Q8CII8 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.1■□□□□ 0.01
Syne4Q8CII8 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syne4Q8CII8 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Syne4Q8CII8 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC15.1■□□□□ 0.01
Syne4Q8CII8 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syne4Q8CII8 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syne4Q8CII8 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Syne4Q8CII8 Gm7899-201ENSMUST00000192935 1897 ntBASIC15.1■□□□□ 0.01
Syne4Q8CII8 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Syne4Q8CII8 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syne4Q8CII8 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syne4Q8CII8 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syne4Q8CII8 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syne4Q8CII8 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syne4Q8CII8 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Syne4Q8CII8 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Syne4Q8CII8 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syne4Q8CII8 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC15.1■□□□□ 0.01
Syne4Q8CII8 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Syne4Q8CII8 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Syne4Q8CII8 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC15.1■□□□□ 0.01
Syne4Q8CII8 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syne4Q8CII8 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syne4Q8CII8 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Syne4Q8CII8 Gm8862-201ENSMUST00000198379 1346 ntBASIC15.1■□□□□ 0.01
Syne4Q8CII8 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Syne4Q8CII8 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syne4Q8CII8 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Syne4Q8CII8 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 149.2 ms