Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 Gm44651-201ENSMUST00000207343 372 ntBASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 Gm32025-201ENSMUST00000217960 307 ntBASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zc3h3Q8CHP0 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.32
Zc3h3Q8CHP0 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Zc3h3Q8CHP0 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.02□□□□□ -0.32
Zc3h3Q8CHP0 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Zc3h3Q8CHP0 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.02□□□□□ -0.32
Zc3h3Q8CHP0 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Zc3h3Q8CHP0 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Zc3h3Q8CHP0 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Zc3h3Q8CHP0 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Zc3h3Q8CHP0 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Zc3h3Q8CHP0 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Zc3h3Q8CHP0 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Zc3h3Q8CHP0 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zc3h3Q8CHP0 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms