Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rdh1Q8CGV4 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.02□□□□□ -0.33
Rdh1Q8CGV4 Gm8062-201ENSMUST00000139696 444 ntBASIC13.02□□□□□ -0.33
Rdh1Q8CGV4 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.02□□□□□ -0.33
Rdh1Q8CGV4 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rdh1Q8CGV4 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rdh1Q8CGV4 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.02□□□□□ -0.33
Rdh1Q8CGV4 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rdh1Q8CGV4 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.02□□□□□ -0.33
Rdh1Q8CGV4 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.02□□□□□ -0.33
Rdh1Q8CGV4 Gm43630-201ENSMUST00000201550 776 ntBASIC13.02□□□□□ -0.33
Rdh1Q8CGV4 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.33
Rdh1Q8CGV4 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.02□□□□□ -0.33
Rdh1Q8CGV4 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rdh1Q8CGV4 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rdh1Q8CGV4 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rdh1Q8CGV4 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.02□□□□□ -0.33
Rdh1Q8CGV4 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rdh1Q8CGV4 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Rdh1Q8CGV4 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.02□□□□□ -0.33
Rdh1Q8CGV4 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rdh1Q8CGV4 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.02□□□□□ -0.33
Rdh1Q8CGV4 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rdh1Q8CGV4 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rdh1Q8CGV4 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rdh1Q8CGV4 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rdh1Q8CGV4 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rdh1Q8CGV4 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rdh1Q8CGV4 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rdh1Q8CGV4 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rdh1Q8CGV4 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rdh1Q8CGV4 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rdh1Q8CGV4 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rdh1Q8CGV4 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rdh1Q8CGV4 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rdh1Q8CGV4 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rdh1Q8CGV4 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rdh1Q8CGV4 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rdh1Q8CGV4 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rdh1Q8CGV4 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rdh1Q8CGV4 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rdh1Q8CGV4 Gm16202-201ENSMUST00000117532 544 ntBASIC13.01□□□□□ -0.33
Rdh1Q8CGV4 Gm12384-201ENSMUST00000119228 919 ntBASIC13.01□□□□□ -0.33
Rdh1Q8CGV4 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.01□□□□□ -0.33
Rdh1Q8CGV4 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rdh1Q8CGV4 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.01□□□□□ -0.33
Rdh1Q8CGV4 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.01□□□□□ -0.33
Rdh1Q8CGV4 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rdh1Q8CGV4 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.01□□□□□ -0.33
Rdh1Q8CGV4 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rdh1Q8CGV4 Gm45841-201ENSMUST00000207700 164 ntBASIC13.01□□□□□ -0.33
Rdh1Q8CGV4 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rdh1Q8CGV4 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.01□□□□□ -0.33
Rdh1Q8CGV4 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.01□□□□□ -0.33
Rdh1Q8CGV4 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rdh1Q8CGV4 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rdh1Q8CGV4 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rdh1Q8CGV4 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rdh1Q8CGV4 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rdh1Q8CGV4 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rdh1Q8CGV4 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rdh1Q8CGV4 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rdh1Q8CGV4 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rdh1Q8CGV4 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rdh1Q8CGV4 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rdh1Q8CGV4 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rdh1Q8CGV4 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rdh1Q8CGV4 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rdh1Q8CGV4 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rdh1Q8CGV4 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
Rdh1Q8CGV4 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Rdh1Q8CGV4 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rdh1Q8CGV4 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Rdh1Q8CGV4 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rdh1Q8CGV4 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rdh1Q8CGV4 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rdh1Q8CGV4 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rdh1Q8CGV4 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Rdh1Q8CGV4 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rdh1Q8CGV4 Dctn4-202ENSMUST00000223590 1530 ntBASIC13□□□□□ -0.33
Rdh1Q8CGV4 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13□□□□□ -0.33
Rdh1Q8CGV4 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rdh1Q8CGV4 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rdh1Q8CGV4 Mir1938-201ENSMUST00000158746 100 ntBASIC13□□□□□ -0.33
Rdh1Q8CGV4 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13□□□□□ -0.33
Rdh1Q8CGV4 Gm8565-201ENSMUST00000183259 1014 ntBASIC13□□□□□ -0.33
Rdh1Q8CGV4 Gm37424-201ENSMUST00000191727 561 ntBASIC13□□□□□ -0.33
Rdh1Q8CGV4 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13□□□□□ -0.33
Rdh1Q8CGV4 Gm44069-201ENSMUST00000204898 506 ntBASIC13□□□□□ -0.33
Rdh1Q8CGV4 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rdh1Q8CGV4 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rdh1Q8CGV4 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13□□□□□ -0.33
Rdh1Q8CGV4 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rdh1Q8CGV4 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Rdh1Q8CGV4 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rdh1Q8CGV4 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Rdh1Q8CGV4 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rdh1Q8CGV4 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rdh1Q8CGV4 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rdh1Q8CGV4 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms