Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc28aQ8CEI3 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc28aQ8CEI3 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc28aQ8CEI3 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc28aQ8CEI3 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc28aQ8CEI3 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc28aQ8CEI3 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc28aQ8CEI3 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.18□□□□□ -0.14
Ccdc28aQ8CEI3 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc28aQ8CEI3 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc28aQ8CEI3 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc28aQ8CEI3 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc28aQ8CEI3 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc28aQ8CEI3 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 Gm10766-202ENSMUST00000194123 606 ntBASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 Gm10253-201ENSMUST00000194270 940 ntBASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 Shd-206ENSMUST00000225145 998 ntBASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc28aQ8CEI3 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28aQ8CEI3 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28aQ8CEI3 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.16□□□□□ -0.14
Ccdc28aQ8CEI3 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28aQ8CEI3 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc28aQ8CEI3 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28aQ8CEI3 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28aQ8CEI3 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ccdc28aQ8CEI3 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28aQ8CEI3 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28aQ8CEI3 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28aQ8CEI3 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28aQ8CEI3 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.16□□□□□ -0.14
Ccdc28aQ8CEI3 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28aQ8CEI3 Gm6912-201ENSMUST00000117218 544 ntBASIC14.16□□□□□ -0.14
Ccdc28aQ8CEI3 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.16□□□□□ -0.14
Ccdc28aQ8CEI3 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.16□□□□□ -0.14
Ccdc28aQ8CEI3 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28aQ8CEI3 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28aQ8CEI3 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28aQ8CEI3 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.16□□□□□ -0.14
Ccdc28aQ8CEI3 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28aQ8CEI3 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28aQ8CEI3 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28aQ8CEI3 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28aQ8CEI3 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28aQ8CEI3 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28aQ8CEI3 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28aQ8CEI3 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28aQ8CEI3 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28aQ8CEI3 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc28aQ8CEI3 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc28aQ8CEI3 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28aQ8CEI3 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.15□□□□□ -0.14
Ccdc28aQ8CEI3 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28aQ8CEI3 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28aQ8CEI3 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28aQ8CEI3 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28aQ8CEI3 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc28aQ8CEI3 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc28aQ8CEI3 Gm8410-201ENSMUST00000117225 605 ntBASIC14.15□□□□□ -0.14
Ccdc28aQ8CEI3 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.15□□□□□ -0.14
Ccdc28aQ8CEI3 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.15□□□□□ -0.14
Ccdc28aQ8CEI3 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms