Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd4Q8CC84 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.04□□□□□ -0.48
Lysmd4Q8CC84 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd4Q8CC84 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd4Q8CC84 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd4Q8CC84 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd4Q8CC84 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.04□□□□□ -0.48
Lysmd4Q8CC84 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd4Q8CC84 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd4Q8CC84 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd4Q8CC84 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.04□□□□□ -0.48
Lysmd4Q8CC84 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Lysmd4Q8CC84 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.04□□□□□ -0.48
Lysmd4Q8CC84 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.04□□□□□ -0.48
Lysmd4Q8CC84 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.04□□□□□ -0.48
Lysmd4Q8CC84 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.04□□□□□ -0.48
Lysmd4Q8CC84 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd4Q8CC84 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd4Q8CC84 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Lysmd4Q8CC84 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd4Q8CC84 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd4Q8CC84 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd4Q8CC84 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd4Q8CC84 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd4Q8CC84 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd4Q8CC84 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd4Q8CC84 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd4Q8CC84 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd4Q8CC84 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd4Q8CC84 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.03□□□□□ -0.48
Lysmd4Q8CC84 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lysmd4Q8CC84 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lysmd4Q8CC84 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lysmd4Q8CC84 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Lysmd4Q8CC84 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lysmd4Q8CC84 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lysmd4Q8CC84 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lysmd4Q8CC84 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lysmd4Q8CC84 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lysmd4Q8CC84 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lysmd4Q8CC84 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lysmd4Q8CC84 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lysmd4Q8CC84 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lysmd4Q8CC84 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Lysmd4Q8CC84 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Lysmd4Q8CC84 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lysmd4Q8CC84 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.03□□□□□ -0.48
Lysmd4Q8CC84 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.03□□□□□ -0.48
Lysmd4Q8CC84 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Lysmd4Q8CC84 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.03□□□□□ -0.48
Lysmd4Q8CC84 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lysmd4Q8CC84 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lysmd4Q8CC84 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lysmd4Q8CC84 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lysmd4Q8CC84 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lysmd4Q8CC84 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lysmd4Q8CC84 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.03□□□□□ -0.48
Lysmd4Q8CC84 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lysmd4Q8CC84 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Lysmd4Q8CC84 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lysmd4Q8CC84 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lysmd4Q8CC84 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lysmd4Q8CC84 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lysmd4Q8CC84 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lysmd4Q8CC84 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
Lysmd4Q8CC84 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lysmd4Q8CC84 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lysmd4Q8CC84 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Lysmd4Q8CC84 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lysmd4Q8CC84 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lysmd4Q8CC84 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lysmd4Q8CC84 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lysmd4Q8CC84 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Lysmd4Q8CC84 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Lysmd4Q8CC84 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lysmd4Q8CC84 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lysmd4Q8CC84 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Lysmd4Q8CC84 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Lysmd4Q8CC84 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lysmd4Q8CC84 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lysmd4Q8CC84 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Lysmd4Q8CC84 Gm6912-201ENSMUST00000117218 544 ntBASIC12.02□□□□□ -0.49
Lysmd4Q8CC84 Gm15770-201ENSMUST00000117498 584 ntBASIC12.02□□□□□ -0.49
Lysmd4Q8CC84 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lysmd4Q8CC84 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.02□□□□□ -0.49
Lysmd4Q8CC84 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.02□□□□□ -0.49
Lysmd4Q8CC84 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lysmd4Q8CC84 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lysmd4Q8CC84 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms