Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Alx1Q8C8B0 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC15.63■□□□□ 0.09
Alx1Q8C8B0 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
Alx1Q8C8B0 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Alx1Q8C8B0 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Alx1Q8C8B0 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Alx1Q8C8B0 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Alx1Q8C8B0 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Alx1Q8C8B0 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC15.63■□□□□ 0.09
Alx1Q8C8B0 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Alx1Q8C8B0 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Alx1Q8C8B0 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Alx1Q8C8B0 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Alx1Q8C8B0 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC15.62■□□□□ 0.09
Alx1Q8C8B0 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Alx1Q8C8B0 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Alx1Q8C8B0 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Alx1Q8C8B0 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Alx1Q8C8B0 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Alx1Q8C8B0 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Alx1Q8C8B0 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Alx1Q8C8B0 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Alx1Q8C8B0 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Alx1Q8C8B0 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
Alx1Q8C8B0 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Alx1Q8C8B0 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Alx1Q8C8B0 Gm37922-201ENSMUST00000195596 455 ntBASIC15.62■□□□□ 0.09
Alx1Q8C8B0 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC15.62■□□□□ 0.09
Alx1Q8C8B0 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC15.62■□□□□ 0.09
Alx1Q8C8B0 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC15.62■□□□□ 0.09
Alx1Q8C8B0 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC15.62■□□□□ 0.09
Alx1Q8C8B0 Gm2824-203ENSMUST00000226189 1228 ntBASIC15.62■□□□□ 0.09
Alx1Q8C8B0 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Alx1Q8C8B0 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Alx1Q8C8B0 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Alx1Q8C8B0 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Alx1Q8C8B0 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Alx1Q8C8B0 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Alx1Q8C8B0 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC15.62■□□□□ 0.09
Alx1Q8C8B0 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Alx1Q8C8B0 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Alx1Q8C8B0 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Alx1Q8C8B0 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Alx1Q8C8B0 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Alx1Q8C8B0 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Alx1Q8C8B0 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Alx1Q8C8B0 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Alx1Q8C8B0 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.61■□□□□ 0.09
Alx1Q8C8B0 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Alx1Q8C8B0 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC15.61■□□□□ 0.09
Alx1Q8C8B0 Gm13123-201ENSMUST00000122173 492 ntBASIC15.61■□□□□ 0.09
Alx1Q8C8B0 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC15.61■□□□□ 0.09
Alx1Q8C8B0 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC15.61■□□□□ 0.09
Alx1Q8C8B0 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Alx1Q8C8B0 Gm43433-201ENSMUST00000196573 481 ntBASIC15.61■□□□□ 0.09
Alx1Q8C8B0 Gm6266-201ENSMUST00000203844 806 ntBASIC15.61■□□□□ 0.09
Alx1Q8C8B0 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC15.61■□□□□ 0.09
Alx1Q8C8B0 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Alx1Q8C8B0 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Alx1Q8C8B0 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Alx1Q8C8B0 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.61■□□□□ 0.09
Alx1Q8C8B0 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Alx1Q8C8B0 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Alx1Q8C8B0 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC15.61■□□□□ 0.09
Alx1Q8C8B0 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Alx1Q8C8B0 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Alx1Q8C8B0 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Alx1Q8C8B0 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Alx1Q8C8B0 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.61■□□□□ 0.09
Alx1Q8C8B0 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Alx1Q8C8B0 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
Alx1Q8C8B0 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Alx1Q8C8B0 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Alx1Q8C8B0 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Alx1Q8C8B0 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Alx1Q8C8B0 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Alx1Q8C8B0 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Alx1Q8C8B0 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Alx1Q8C8B0 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Alx1Q8C8B0 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.6■□□□□ 0.09
Alx1Q8C8B0 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC15.6■□□□□ 0.09
Alx1Q8C8B0 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Alx1Q8C8B0 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Alx1Q8C8B0 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Alx1Q8C8B0 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Alx1Q8C8B0 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Alx1Q8C8B0 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC15.6■□□□□ 0.09
Alx1Q8C8B0 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Alx1Q8C8B0 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.6■□□□□ 0.09
Alx1Q8C8B0 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC15.6■□□□□ 0.09
Alx1Q8C8B0 Gm29705-201ENSMUST00000212598 474 ntBASIC15.6■□□□□ 0.09
Alx1Q8C8B0 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC15.6■□□□□ 0.09
Alx1Q8C8B0 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Alx1Q8C8B0 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Alx1Q8C8B0 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.6■□□□□ 0.09
Alx1Q8C8B0 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Alx1Q8C8B0 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.6■□□□□ 0.09
Alx1Q8C8B0 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.6■□□□□ 0.09
Alx1Q8C8B0 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.6■□□□□ 0.09
Alx1Q8C8B0 Gm44891-201ENSMUST00000208817 2223 ntBASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms