Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim9Q8C7M3 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.82□□□□□ -0.04
Trim9Q8C7M3 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim9Q8C7M3 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim9Q8C7M3 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim9Q8C7M3 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trim9Q8C7M3 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim9Q8C7M3 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim9Q8C7M3 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.81□□□□□ -0.04
Trim9Q8C7M3 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim9Q8C7M3 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim9Q8C7M3 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim9Q8C7M3 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim9Q8C7M3 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim9Q8C7M3 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim9Q8C7M3 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.81□□□□□ -0.04
Trim9Q8C7M3 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trim9Q8C7M3 Mir7221-201ENSMUST00000184009 72 ntBASIC14.81□□□□□ -0.04
Trim9Q8C7M3 Gm38223-201ENSMUST00000194484 695 ntBASIC14.81□□□□□ -0.04
Trim9Q8C7M3 Gm37917-201ENSMUST00000194711 392 ntBASIC14.81□□□□□ -0.04
Trim9Q8C7M3 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim9Q8C7M3 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.81□□□□□ -0.04
Trim9Q8C7M3 Gm18624-201ENSMUST00000220966 658 ntBASIC14.81□□□□□ -0.04
Trim9Q8C7M3 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim9Q8C7M3 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim9Q8C7M3 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Trim9Q8C7M3 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim9Q8C7M3 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim9Q8C7M3 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim9Q8C7M3 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim9Q8C7M3 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim9Q8C7M3 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim9Q8C7M3 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim9Q8C7M3 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim9Q8C7M3 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim9Q8C7M3 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim9Q8C7M3 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim9Q8C7M3 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trim9Q8C7M3 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim9Q8C7M3 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.8□□□□□ -0.04
Trim9Q8C7M3 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.8□□□□□ -0.04
Trim9Q8C7M3 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim9Q8C7M3 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.8□□□□□ -0.04
Trim9Q8C7M3 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim9Q8C7M3 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim9Q8C7M3 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim9Q8C7M3 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.8□□□□□ -0.04
Trim9Q8C7M3 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.8□□□□□ -0.04
Trim9Q8C7M3 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim9Q8C7M3 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim9Q8C7M3 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.8□□□□□ -0.04
Trim9Q8C7M3 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.8□□□□□ -0.04
Trim9Q8C7M3 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.8□□□□□ -0.04
Trim9Q8C7M3 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.8□□□□□ -0.04
Trim9Q8C7M3 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Trim9Q8C7M3 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim9Q8C7M3 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim9Q8C7M3 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim9Q8C7M3 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trim9Q8C7M3 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim9Q8C7M3 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim9Q8C7M3 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim9Q8C7M3 Mir7654-201ENSMUST00000185082 70 ntBASIC14.8□□□□□ -0.04
Trim9Q8C7M3 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.8□□□□□ -0.04
Trim9Q8C7M3 Gm18307-201ENSMUST00000206864 949 ntBASIC14.8□□□□□ -0.04
Trim9Q8C7M3 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.8□□□□□ -0.04
Trim9Q8C7M3 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim9Q8C7M3 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim9Q8C7M3 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim9Q8C7M3 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim9Q8C7M3 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trim9Q8C7M3 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim9Q8C7M3 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim9Q8C7M3 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim9Q8C7M3 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim9Q8C7M3 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim9Q8C7M3 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim9Q8C7M3 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim9Q8C7M3 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim9Q8C7M3 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.79□□□□□ -0.04
Trim9Q8C7M3 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.79□□□□□ -0.04
Trim9Q8C7M3 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim9Q8C7M3 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim9Q8C7M3 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim9Q8C7M3 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trim9Q8C7M3 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim9Q8C7M3 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trim9Q8C7M3 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Trim9Q8C7M3 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.79□□□□□ -0.04
Trim9Q8C7M3 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim9Q8C7M3 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim9Q8C7M3 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.79□□□□□ -0.04
Trim9Q8C7M3 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.79□□□□□ -0.04
Trim9Q8C7M3 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trim9Q8C7M3 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Trim9Q8C7M3 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim9Q8C7M3 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim9Q8C7M3 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.79□□□□□ -0.04
Trim9Q8C7M3 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.79□□□□□ -0.04
Trim9Q8C7M3 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms