Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a6Q8C6K9 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a6Q8C6K9 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a6Q8C6K9 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a6Q8C6K9 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a6Q8C6K9 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a6Q8C6K9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a6Q8C6K9 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Col6a6Q8C6K9 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a6Q8C6K9 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a6Q8C6K9 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a6Q8C6K9 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.1□□□□□ -0.47
Col6a6Q8C6K9 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a6Q8C6K9 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a6Q8C6K9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a6Q8C6K9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a6Q8C6K9 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a6Q8C6K9 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a6Q8C6K9 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.1□□□□□ -0.47
Col6a6Q8C6K9 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a6Q8C6K9 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.1□□□□□ -0.47
Col6a6Q8C6K9 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a6Q8C6K9 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Col6a6Q8C6K9 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a6Q8C6K9 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a6Q8C6K9 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a6Q8C6K9 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a6Q8C6K9 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a6Q8C6K9 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a6Q8C6K9 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Col6a6Q8C6K9 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a6Q8C6K9 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a6Q8C6K9 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.1□□□□□ -0.47
Col6a6Q8C6K9 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Col6a6Q8C6K9 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a6Q8C6K9 Gm22334-201ENSMUST00000158070 133 ntBASIC12.09□□□□□ -0.47
Col6a6Q8C6K9 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a6Q8C6K9 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.09□□□□□ -0.47
Col6a6Q8C6K9 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a6Q8C6K9 Nsd1-205ENSMUST00000224693 852 ntBASIC12.09□□□□□ -0.47
Col6a6Q8C6K9 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a6Q8C6K9 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a6Q8C6K9 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a6Q8C6K9 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a6Q8C6K9 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a6Q8C6K9 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Col6a6Q8C6K9 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a6Q8C6K9 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a6Q8C6K9 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a6Q8C6K9 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Col6a6Q8C6K9 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a6Q8C6K9 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a6Q8C6K9 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a6Q8C6K9 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Col6a6Q8C6K9 Gm14263-201ENSMUST00000117955 746 ntBASIC12.09□□□□□ -0.47
Col6a6Q8C6K9 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.09□□□□□ -0.47
Col6a6Q8C6K9 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.09□□□□□ -0.47
Col6a6Q8C6K9 Gm30285-201ENSMUST00000214614 422 ntBASIC12.09□□□□□ -0.47
Col6a6Q8C6K9 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a6Q8C6K9 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a6Q8C6K9 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a6Q8C6K9 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a6Q8C6K9 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.09□□□□□ -0.47
Col6a6Q8C6K9 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a6Q8C6K9 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a6Q8C6K9 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.09□□□□□ -0.47
Col6a6Q8C6K9 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.09□□□□□ -0.47
Col6a6Q8C6K9 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Col6a6Q8C6K9 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a6Q8C6K9 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a6Q8C6K9 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Col6a6Q8C6K9 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Col6a6Q8C6K9 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.08□□□□□ -0.47
Col6a6Q8C6K9 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Col6a6Q8C6K9 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Col6a6Q8C6K9 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col6a6Q8C6K9 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col6a6Q8C6K9 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.08□□□□□ -0.48
Col6a6Q8C6K9 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col6a6Q8C6K9 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Col6a6Q8C6K9 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Col6a6Q8C6K9 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col6a6Q8C6K9 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col6a6Q8C6K9 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col6a6Q8C6K9 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Col6a6Q8C6K9 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col6a6Q8C6K9 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Col6a6Q8C6K9 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Col6a6Q8C6K9 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col6a6Q8C6K9 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col6a6Q8C6K9 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col6a6Q8C6K9 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Col6a6Q8C6K9 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col6a6Q8C6K9 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col6a6Q8C6K9 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Col6a6Q8C6K9 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col6a6Q8C6K9 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col6a6Q8C6K9 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col6a6Q8C6K9 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col6a6Q8C6K9 Gm10434-201ENSMUST00000101158 471 ntBASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms