Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps9d1Q8C190 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.6□□□□□ -0.39
Vps9d1Q8C190 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps9d1Q8C190 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps9d1Q8C190 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Vps9d1Q8C190 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps9d1Q8C190 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps9d1Q8C190 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps9d1Q8C190 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps9d1Q8C190 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps9d1Q8C190 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps9d1Q8C190 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.6□□□□□ -0.39
Vps9d1Q8C190 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps9d1Q8C190 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.6□□□□□ -0.39
Vps9d1Q8C190 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.6□□□□□ -0.39
Vps9d1Q8C190 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps9d1Q8C190 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Vps9d1Q8C190 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps9d1Q8C190 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Vps9d1Q8C190 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps9d1Q8C190 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps9d1Q8C190 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps9d1Q8C190 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps9d1Q8C190 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.6□□□□□ -0.39
Vps9d1Q8C190 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps9d1Q8C190 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps9d1Q8C190 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Gm15693-201ENSMUST00000120470 637 ntBASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Gm29541-201ENSMUST00000191351 678 ntBASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.59□□□□□ -0.39
Vps9d1Q8C190 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps9d1Q8C190 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Vps9d1Q8C190 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Vps9d1Q8C190 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps9d1Q8C190 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Vps9d1Q8C190 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Vps9d1Q8C190 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vps9d1Q8C190 Gm24543-201ENSMUST00000103867 82 ntBASIC12.58□□□□□ -0.4
Vps9d1Q8C190 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vps9d1Q8C190 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.58□□□□□ -0.4
Vps9d1Q8C190 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps9d1Q8C190 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps9d1Q8C190 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vps9d1Q8C190 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms