Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trim47Q8C0E3 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim47Q8C0E3 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim47Q8C0E3 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim47Q8C0E3 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trim47Q8C0E3 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim47Q8C0E3 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim47Q8C0E3 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim47Q8C0E3 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim47Q8C0E3 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.89□□□□□ -0.03
Trim47Q8C0E3 Matn2-206ENSMUST00000228570 2798 ntBASIC14.89□□□□□ -0.03
Trim47Q8C0E3 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.89□□□□□ -0.03
Trim47Q8C0E3 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trim47Q8C0E3 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trim47Q8C0E3 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim47Q8C0E3 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trim47Q8C0E3 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim47Q8C0E3 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim47Q8C0E3 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim47Q8C0E3 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim47Q8C0E3 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim47Q8C0E3 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim47Q8C0E3 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim47Q8C0E3 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim47Q8C0E3 Gm15824-201ENSMUST00000119516 955 ntBASIC14.88□□□□□ -0.03
Trim47Q8C0E3 Gm8810-201ENSMUST00000172895 754 ntBASIC14.88□□□□□ -0.03
Trim47Q8C0E3 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.88□□□□□ -0.03
Trim47Q8C0E3 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.88□□□□□ -0.03
Trim47Q8C0E3 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Trim47Q8C0E3 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.88□□□□□ -0.03
Trim47Q8C0E3 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim47Q8C0E3 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim47Q8C0E3 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim47Q8C0E3 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim47Q8C0E3 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim47Q8C0E3 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim47Q8C0E3 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim47Q8C0E3 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.88□□□□□ -0.03
Trim47Q8C0E3 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim47Q8C0E3 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim47Q8C0E3 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim47Q8C0E3 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim47Q8C0E3 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trim47Q8C0E3 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC14.88□□□□□ -0.03
Trim47Q8C0E3 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.88□□□□□ -0.03
Trim47Q8C0E3 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
Trim47Q8C0E3 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim47Q8C0E3 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trim47Q8C0E3 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Trim47Q8C0E3 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trim47Q8C0E3 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Gm4984-201ENSMUST00000115987 360 ntBASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Gm24196-201ENSMUST00000179161 110 ntBASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Gm28196-201ENSMUST00000187719 640 ntBASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trim47Q8C0E3 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim47Q8C0E3 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim47Q8C0E3 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.86□□□□□ -0.03
Trim47Q8C0E3 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim47Q8C0E3 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim47Q8C0E3 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim47Q8C0E3 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms