Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sh3rf2Q8BZT2 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.58□□□□□ -0.23
Sh3rf2Q8BZT2 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sh3rf2Q8BZT2 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.23
Sh3rf2Q8BZT2 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sh3rf2Q8BZT2 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sh3rf2Q8BZT2 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3rf2Q8BZT2 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.58□□□□□ -0.24
Sh3rf2Q8BZT2 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3rf2Q8BZT2 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Sh3rf2Q8BZT2 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3rf2Q8BZT2 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3rf2Q8BZT2 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.58□□□□□ -0.24
Sh3rf2Q8BZT2 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Sh3rf2Q8BZT2 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.58□□□□□ -0.24
Sh3rf2Q8BZT2 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.58□□□□□ -0.24
Sh3rf2Q8BZT2 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.58□□□□□ -0.24
Sh3rf2Q8BZT2 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.58□□□□□ -0.24
Sh3rf2Q8BZT2 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.58□□□□□ -0.24
Sh3rf2Q8BZT2 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3rf2Q8BZT2 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3rf2Q8BZT2 Gm10146-201ENSMUST00000072739 309 ntBASIC13.58□□□□□ -0.24
Sh3rf2Q8BZT2 Gm10268-201ENSMUST00000085340 555 ntBASIC13.58□□□□□ -0.24
Sh3rf2Q8BZT2 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3rf2Q8BZT2 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.58□□□□□ -0.24
Sh3rf2Q8BZT2 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3rf2Q8BZT2 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3rf2Q8BZT2 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.58□□□□□ -0.24
Sh3rf2Q8BZT2 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3rf2Q8BZT2 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3rf2Q8BZT2 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3rf2Q8BZT2 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Sh3rf2Q8BZT2 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Sh3rf2Q8BZT2 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3rf2Q8BZT2 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3rf2Q8BZT2 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3rf2Q8BZT2 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3rf2Q8BZT2 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf2Q8BZT2 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Sh3rf2Q8BZT2 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf2Q8BZT2 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf2Q8BZT2 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf2Q8BZT2 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf2Q8BZT2 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf2Q8BZT2 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf2Q8BZT2 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.57□□□□□ -0.24
Sh3rf2Q8BZT2 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf2Q8BZT2 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.57□□□□□ -0.24
Sh3rf2Q8BZT2 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf2Q8BZT2 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf2Q8BZT2 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Sh3rf2Q8BZT2 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf2Q8BZT2 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Sh3rf2Q8BZT2 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Sh3rf2Q8BZT2 Gm16202-201ENSMUST00000117532 544 ntBASIC13.57□□□□□ -0.24
Sh3rf2Q8BZT2 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.57□□□□□ -0.24
Sh3rf2Q8BZT2 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Sh3rf2Q8BZT2 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf2Q8BZT2 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf2Q8BZT2 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.57□□□□□ -0.24
Sh3rf2Q8BZT2 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf2Q8BZT2 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.57□□□□□ -0.24
Sh3rf2Q8BZT2 Gm44069-201ENSMUST00000204898 506 ntBASIC13.57□□□□□ -0.24
Sh3rf2Q8BZT2 Gm45880-201ENSMUST00000213041 853 ntBASIC13.57□□□□□ -0.24
Sh3rf2Q8BZT2 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf2Q8BZT2 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Sh3rf2Q8BZT2 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Sh3rf2Q8BZT2 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf2Q8BZT2 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf2Q8BZT2 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf2Q8BZT2 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.57□□□□□ -0.24
Sh3rf2Q8BZT2 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf2Q8BZT2 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf2Q8BZT2 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.57□□□□□ -0.24
Sh3rf2Q8BZT2 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms