Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cpne3Q8BT60 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cpne3Q8BT60 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13□□□□□ -0.33
Cpne3Q8BT60 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cpne3Q8BT60 Gm13616-201ENSMUST00000120600 222 ntBASIC13□□□□□ -0.33
Cpne3Q8BT60 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13□□□□□ -0.33
Cpne3Q8BT60 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13□□□□□ -0.33
Cpne3Q8BT60 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13□□□□□ -0.33
Cpne3Q8BT60 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cpne3Q8BT60 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cpne3Q8BT60 Gm10766-202ENSMUST00000194123 606 ntBASIC13□□□□□ -0.33
Cpne3Q8BT60 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cpne3Q8BT60 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cpne3Q8BT60 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cpne3Q8BT60 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cpne3Q8BT60 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cpne3Q8BT60 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cpne3Q8BT60 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cpne3Q8BT60 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13□□□□□ -0.33
Cpne3Q8BT60 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cpne3Q8BT60 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cpne3Q8BT60 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cpne3Q8BT60 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Cpne3Q8BT60 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cpne3Q8BT60 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cpne3Q8BT60 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cpne3Q8BT60 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cpne3Q8BT60 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpne3Q8BT60 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cpne3Q8BT60 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpne3Q8BT60 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cpne3Q8BT60 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cpne3Q8BT60 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cpne3Q8BT60 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpne3Q8BT60 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpne3Q8BT60 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.99□□□□□ -0.33
Cpne3Q8BT60 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpne3Q8BT60 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpne3Q8BT60 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpne3Q8BT60 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpne3Q8BT60 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cpne3Q8BT60 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.99□□□□□ -0.33
Cpne3Q8BT60 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpne3Q8BT60 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpne3Q8BT60 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpne3Q8BT60 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Cpne3Q8BT60 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.99□□□□□ -0.33
Cpne3Q8BT60 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cpne3Q8BT60 Gm43703-201ENSMUST00000200523 763 ntBASIC12.99□□□□□ -0.33
Cpne3Q8BT60 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.99□□□□□ -0.33
Cpne3Q8BT60 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.99□□□□□ -0.33
Cpne3Q8BT60 Gm5425-201ENSMUST00000214125 459 ntBASIC12.99□□□□□ -0.33
Cpne3Q8BT60 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpne3Q8BT60 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpne3Q8BT60 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpne3Q8BT60 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpne3Q8BT60 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpne3Q8BT60 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpne3Q8BT60 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cpne3Q8BT60 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cpne3Q8BT60 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpne3Q8BT60 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Cpne3Q8BT60 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.99□□□□□ -0.33
Cpne3Q8BT60 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpne3Q8BT60 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cpne3Q8BT60 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cpne3Q8BT60 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpne3Q8BT60 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Cpne3Q8BT60 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Cpne3Q8BT60 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpne3Q8BT60 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpne3Q8BT60 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpne3Q8BT60 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Cpne3Q8BT60 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpne3Q8BT60 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpne3Q8BT60 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpne3Q8BT60 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpne3Q8BT60 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.98□□□□□ -0.33
Cpne3Q8BT60 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpne3Q8BT60 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpne3Q8BT60 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.98□□□□□ -0.33
Cpne3Q8BT60 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpne3Q8BT60 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.98□□□□□ -0.33
Cpne3Q8BT60 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpne3Q8BT60 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpne3Q8BT60 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.98□□□□□ -0.33
Cpne3Q8BT60 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.98□□□□□ -0.33
Cpne3Q8BT60 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpne3Q8BT60 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.98□□□□□ -0.33
Cpne3Q8BT60 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.98□□□□□ -0.33
Cpne3Q8BT60 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpne3Q8BT60 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpne3Q8BT60 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Cpne3Q8BT60 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cpne3Q8BT60 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpne3Q8BT60 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cpne3Q8BT60 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.98□□□□□ -0.33
Cpne3Q8BT60 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpne3Q8BT60 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpne3Q8BT60 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms