Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2bQ8BJF9 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2bQ8BJF9 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Chmp2bQ8BJF9 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.79□□□□□ -0.2
Chmp2bQ8BJF9 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Chmp2bQ8BJF9 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp2bQ8BJF9 Paupar-201ENSMUST00000194826 3482 ntBASIC13.78□□□□□ -0.2
Chmp2bQ8BJF9 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp2bQ8BJF9 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp2bQ8BJF9 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp2bQ8BJF9 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp2bQ8BJF9 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp2bQ8BJF9 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
Chmp2bQ8BJF9 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.78□□□□□ -0.2
Chmp2bQ8BJF9 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.78□□□□□ -0.2
Chmp2bQ8BJF9 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp2bQ8BJF9 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Chmp2bQ8BJF9 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.78□□□□□ -0.2
Chmp2bQ8BJF9 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp2bQ8BJF9 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp2bQ8BJF9 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp2bQ8BJF9 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.78□□□□□ -0.2
Chmp2bQ8BJF9 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.78□□□□□ -0.2
Chmp2bQ8BJF9 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.78□□□□□ -0.2
Chmp2bQ8BJF9 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.78□□□□□ -0.2
Chmp2bQ8BJF9 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp2bQ8BJF9 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp2bQ8BJF9 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp2bQ8BJF9 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Chmp2bQ8BJF9 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp2bQ8BJF9 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp2bQ8BJF9 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp2bQ8BJF9 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp2bQ8BJF9 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp2bQ8BJF9 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp2bQ8BJF9 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp2bQ8BJF9 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Chmp2bQ8BJF9 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Chmp2bQ8BJF9 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.2
Chmp2bQ8BJF9 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Chmp2bQ8BJF9 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Chmp2bQ8BJF9 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Chmp2bQ8BJF9 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Chmp2bQ8BJF9 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp2bQ8BJF9 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.77□□□□□ -0.21
Chmp2bQ8BJF9 Gm15393-201ENSMUST00000120499 219 ntBASIC13.77□□□□□ -0.21
Chmp2bQ8BJF9 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp2bQ8BJF9 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp2bQ8BJF9 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Chmp2bQ8BJF9 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp2bQ8BJF9 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp2bQ8BJF9 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.77□□□□□ -0.21
Chmp2bQ8BJF9 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.77□□□□□ -0.21
Chmp2bQ8BJF9 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp2bQ8BJF9 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp2bQ8BJF9 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp2bQ8BJF9 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Chmp2bQ8BJF9 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp2bQ8BJF9 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp2bQ8BJF9 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp2bQ8BJF9 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp2bQ8BJF9 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.77□□□□□ -0.21
Chmp2bQ8BJF9 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp2bQ8BJF9 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp2bQ8BJF9 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp2bQ8BJF9 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp2bQ8BJF9 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp2bQ8BJF9 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp2bQ8BJF9 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp2bQ8BJF9 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Chmp2bQ8BJF9 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.76□□□□□ -0.21
Chmp2bQ8BJF9 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp2bQ8BJF9 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp2bQ8BJF9 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Chmp2bQ8BJF9 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp2bQ8BJF9 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Chmp2bQ8BJF9 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.76□□□□□ -0.21
Chmp2bQ8BJF9 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Chmp2bQ8BJF9 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp2bQ8BJF9 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp2bQ8BJF9 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp2bQ8BJF9 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.76□□□□□ -0.21
Chmp2bQ8BJF9 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.76□□□□□ -0.21
Chmp2bQ8BJF9 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Chmp2bQ8BJF9 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp2bQ8BJF9 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Chmp2bQ8BJF9 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.76□□□□□ -0.21
Chmp2bQ8BJF9 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.76□□□□□ -0.21
Chmp2bQ8BJF9 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp2bQ8BJF9 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp2bQ8BJF9 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp2bQ8BJF9 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp2bQ8BJF9 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp2bQ8BJF9 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp2bQ8BJF9 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp2bQ8BJF9 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp2bQ8BJF9 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp2bQ8BJF9 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Chmp2bQ8BJF9 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp2bQ8BJF9 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms