Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 Syt7-205ENSMUST00000224135 1557 ntBASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 Gm7488-201ENSMUST00000117148 684 ntBASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 Gm44855-201ENSMUST00000205725 362 ntBASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 Gm5425-201ENSMUST00000214125 459 ntBASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 Gm2423-201ENSMUST00000074863 733 ntBASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Pcdh20Q8BIZ0 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh20Q8BIZ0 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Pcdh20Q8BIZ0 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Pcdh20Q8BIZ0 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh20Q8BIZ0 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh20Q8BIZ0 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh20Q8BIZ0 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh20Q8BIZ0 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh20Q8BIZ0 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdh20Q8BIZ0 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh20Q8BIZ0 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdh20Q8BIZ0 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh20Q8BIZ0 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Pcdh20Q8BIZ0 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh20Q8BIZ0 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Pcdh20Q8BIZ0 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh20Q8BIZ0 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh20Q8BIZ0 Gm2445-201ENSMUST00000182798 989 ntBASIC13.11□□□□□ -0.31
Pcdh20Q8BIZ0 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.11□□□□□ -0.31
Pcdh20Q8BIZ0 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh20Q8BIZ0 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh20Q8BIZ0 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms