Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh19Q80TF3 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdh19Q80TF3 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh19Q80TF3 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.18□□□□□ -0.3
Pcdh19Q80TF3 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdh19Q80TF3 Gm45784-201ENSMUST00000188360 142 ntBASIC13.18□□□□□ -0.3
Pcdh19Q80TF3 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh19Q80TF3 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh19Q80TF3 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh19Q80TF3 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh19Q80TF3 Gm10012-201ENSMUST00000078252 192 ntBASIC13.18□□□□□ -0.3
Pcdh19Q80TF3 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh19Q80TF3 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh19Q80TF3 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh19Q80TF3 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh19Q80TF3 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh19Q80TF3 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh19Q80TF3 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdh19Q80TF3 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh19Q80TF3 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh19Q80TF3 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.18□□□□□ -0.3
Pcdh19Q80TF3 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh19Q80TF3 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh19Q80TF3 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh19Q80TF3 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh19Q80TF3 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh19Q80TF3 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 Gm12742-201ENSMUST00000117326 410 ntBASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 Gm13226-201ENSMUST00000117838 404 ntBASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 Gm22331-201ENSMUST00000158066 136 ntBASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 Gm45841-201ENSMUST00000207700 164 ntBASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pcdh19Q80TF3 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh19Q80TF3 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh19Q80TF3 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh19Q80TF3 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdh19Q80TF3 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh19Q80TF3 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh19Q80TF3 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdh19Q80TF3 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh19Q80TF3 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pcdh19Q80TF3 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh19Q80TF3 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh19Q80TF3 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh19Q80TF3 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh19Q80TF3 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh19Q80TF3 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh19Q80TF3 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh19Q80TF3 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdh19Q80TF3 Gm11803-201ENSMUST00000119966 444 ntBASIC13.16□□□□□ -0.3
Pcdh19Q80TF3 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdh19Q80TF3 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.16□□□□□ -0.3
Pcdh19Q80TF3 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.16□□□□□ -0.3
Pcdh19Q80TF3 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.16□□□□□ -0.3
Pcdh19Q80TF3 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh19Q80TF3 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.16□□□□□ -0.3
Pcdh19Q80TF3 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
Pcdh19Q80TF3 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh19Q80TF3 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh19Q80TF3 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh19Q80TF3 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Pcdh19Q80TF3 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdh19Q80TF3 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
Pcdh19Q80TF3 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh19Q80TF3 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh19Q80TF3 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.16□□□□□ -0.3
Pcdh19Q80TF3 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh19Q80TF3 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms