Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh8Q7TSK3 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh8Q7TSK3 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Gm2445-201ENSMUST00000182798 989 ntBASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Gm43630-201ENSMUST00000201550 776 ntBASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.25□□□□□ -0.29
Pcdh8Q7TSK3 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 Gm12957-201ENSMUST00000117835 377 ntBASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 Gm45784-201ENSMUST00000188360 142 ntBASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh8Q7TSK3 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.23□□□□□ -0.29
Pcdh8Q7TSK3 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh8Q7TSK3 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh8Q7TSK3 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.23□□□□□ -0.29
Pcdh8Q7TSK3 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh8Q7TSK3 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.23□□□□□ -0.29
Pcdh8Q7TSK3 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh8Q7TSK3 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh8Q7TSK3 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh8Q7TSK3 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh8Q7TSK3 Gm13226-201ENSMUST00000117838 404 ntBASIC13.23□□□□□ -0.29
Pcdh8Q7TSK3 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.23□□□□□ -0.29
Pcdh8Q7TSK3 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh8Q7TSK3 Gm18473-201ENSMUST00000220543 868 ntBASIC13.23□□□□□ -0.29
Pcdh8Q7TSK3 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms