Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ddx55Q6ZPL9 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx55Q6ZPL9 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Ddx55Q6ZPL9 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx55Q6ZPL9 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx55Q6ZPL9 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx55Q6ZPL9 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ddx55Q6ZPL9 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx55Q6ZPL9 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx55Q6ZPL9 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx55Q6ZPL9 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx55Q6ZPL9 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Ddx55Q6ZPL9 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Ddx55Q6ZPL9 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx55Q6ZPL9 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx55Q6ZPL9 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Ddx55Q6ZPL9 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx55Q6ZPL9 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx55Q6ZPL9 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx55Q6ZPL9 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ddx55Q6ZPL9 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx55Q6ZPL9 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx55Q6ZPL9 Gm12502-201ENSMUST00000120197 444 ntBASIC15.19■□□□□ 0.02
Ddx55Q6ZPL9 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC15.19■□□□□ 0.02
Ddx55Q6ZPL9 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ddx55Q6ZPL9 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC15.19■□□□□ 0.02
Ddx55Q6ZPL9 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC15.19■□□□□ 0.02
Ddx55Q6ZPL9 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx55Q6ZPL9 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx55Q6ZPL9 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx55Q6ZPL9 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC15.19■□□□□ 0.02
Ddx55Q6ZPL9 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx55Q6ZPL9 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx55Q6ZPL9 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx55Q6ZPL9 AC101945.2-201ENSMUST00000227886 1377 ntBASIC15.19■□□□□ 0.02
Ddx55Q6ZPL9 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx55Q6ZPL9 Gm10782-202ENSMUST00000223775 1480 ntBASIC15.19■□□□□ 0.02
Ddx55Q6ZPL9 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx55Q6ZPL9 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx55Q6ZPL9 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC15.19■□□□□ 0.02
Ddx55Q6ZPL9 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.19■□□□□ 0.02
Ddx55Q6ZPL9 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx55Q6ZPL9 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx55Q6ZPL9 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx55Q6ZPL9 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Gm26956-201ENSMUST00000182176 986 ntBASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Gm2260-201ENSMUST00000184965 657 ntBASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Gm6458-201ENSMUST00000211573 635 ntBASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Gm18615-201ENSMUST00000222919 1031 ntBASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ddx55Q6ZPL9 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC15.17■□□□□ 0.02
Ddx55Q6ZPL9 Gm8862-201ENSMUST00000198379 1346 ntBASIC15.17■□□□□ 0.02
Ddx55Q6ZPL9 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Ddx55Q6ZPL9 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ddx55Q6ZPL9 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ddx55Q6ZPL9 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx55Q6ZPL9 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ddx55Q6ZPL9 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx55Q6ZPL9 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx55Q6ZPL9 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx55Q6ZPL9 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Ddx55Q6ZPL9 Gm13097-201ENSMUST00000210722 397 ntBASIC15.17■□□□□ 0.02
Ddx55Q6ZPL9 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx55Q6ZPL9 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms