Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Gm5479-201ENSMUST00000160578 435 ntBASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf220Q6PDX6 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.71□□□□□ -0.37
Rnf220Q6PDX6 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.71□□□□□ -0.37
Rnf220Q6PDX6 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf220Q6PDX6 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf220Q6PDX6 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf220Q6PDX6 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf220Q6PDX6 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf220Q6PDX6 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf220Q6PDX6 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf220Q6PDX6 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf220Q6PDX6 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf220Q6PDX6 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf220Q6PDX6 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf220Q6PDX6 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.71□□□□□ -0.37
Rnf220Q6PDX6 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf220Q6PDX6 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf220Q6PDX6 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf220Q6PDX6 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf220Q6PDX6 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf220Q6PDX6 Gm18733-201ENSMUST00000173950 856 ntBASIC12.71□□□□□ -0.37
Rnf220Q6PDX6 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf220Q6PDX6 Psmb5-202ENSMUST00000227257 622 ntBASIC12.71□□□□□ -0.37
Rnf220Q6PDX6 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf220Q6PDX6 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.71□□□□□ -0.37
Rnf220Q6PDX6 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf220Q6PDX6 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf220Q6PDX6 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf220Q6PDX6 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Rnf220Q6PDX6 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf220Q6PDX6 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf220Q6PDX6 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf220Q6PDX6 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf220Q6PDX6 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf220Q6PDX6 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf220Q6PDX6 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.7□□□□□ -0.38
Rnf220Q6PDX6 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms