Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chd4Q6PDQ2 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC17.21■□□□□ 0.35
Chd4Q6PDQ2 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC17.21■□□□□ 0.35
Chd4Q6PDQ2 Gm27341-201ENSMUST00000183570 106 ntBASIC17.21■□□□□ 0.35
Chd4Q6PDQ2 Gm39404-201ENSMUST00000216350 313 ntBASIC17.21■□□□□ 0.35
Chd4Q6PDQ2 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chd4Q6PDQ2 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Chd4Q6PDQ2 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Chd4Q6PDQ2 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd4Q6PDQ2 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Chd4Q6PDQ2 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd4Q6PDQ2 Gm10729-202ENSMUST00000193403 1375 ntBASIC17.2■□□□□ 0.34
Chd4Q6PDQ2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd4Q6PDQ2 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd4Q6PDQ2 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd4Q6PDQ2 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd4Q6PDQ2 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd4Q6PDQ2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd4Q6PDQ2 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC17.2■□□□□ 0.34
Chd4Q6PDQ2 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC17.2■□□□□ 0.34
Chd4Q6PDQ2 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC17.2■□□□□ 0.34
Chd4Q6PDQ2 Gm6652-201ENSMUST00000186414 1070 ntBASIC17.2■□□□□ 0.34
Chd4Q6PDQ2 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd4Q6PDQ2 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC17.2■□□□□ 0.34
Chd4Q6PDQ2 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd4Q6PDQ2 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd4Q6PDQ2 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC17.2■□□□□ 0.34
Chd4Q6PDQ2 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chd4Q6PDQ2 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chd4Q6PDQ2 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Chd4Q6PDQ2 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd4Q6PDQ2 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chd4Q6PDQ2 Gm4760-201ENSMUST00000119663 1030 ntBASIC17.19■□□□□ 0.34
Chd4Q6PDQ2 Gm12176-201ENSMUST00000121420 875 ntBASIC17.19■□□□□ 0.34
Chd4Q6PDQ2 Mir6927-201ENSMUST00000184494 71 ntBASIC17.19■□□□□ 0.34
Chd4Q6PDQ2 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chd4Q6PDQ2 Gm45224-201ENSMUST00000208203 414 ntBASIC17.19■□□□□ 0.34
Chd4Q6PDQ2 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Chd4Q6PDQ2 AC108416.1-202ENSMUST00000228927 1201 ntBASIC17.19■□□□□ 0.34
Chd4Q6PDQ2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Chd4Q6PDQ2 Gm11405-201ENSMUST00000118689 1556 ntBASIC17.19■□□□□ 0.34
Chd4Q6PDQ2 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd4Q6PDQ2 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC17.19■□□□□ 0.34
Chd4Q6PDQ2 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd4Q6PDQ2 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC17.19■□□□□ 0.34
Chd4Q6PDQ2 Gm13570-201ENSMUST00000140763 309 ntBASIC17.19■□□□□ 0.34
Chd4Q6PDQ2 Gm15276-201ENSMUST00000145953 498 ntBASIC17.19■□□□□ 0.34
Chd4Q6PDQ2 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chd4Q6PDQ2 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd4Q6PDQ2 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC17.19■□□□□ 0.34
Chd4Q6PDQ2 Gm5904-201ENSMUST00000210286 865 ntBASIC17.19■□□□□ 0.34
Chd4Q6PDQ2 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Chd4Q6PDQ2 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chd4Q6PDQ2 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chd4Q6PDQ2 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chd4Q6PDQ2 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd4Q6PDQ2 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd4Q6PDQ2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd4Q6PDQ2 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd4Q6PDQ2 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd4Q6PDQ2 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd4Q6PDQ2 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Chd4Q6PDQ2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd4Q6PDQ2 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd4Q6PDQ2 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Chd4Q6PDQ2 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chd4Q6PDQ2 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd4Q6PDQ2 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd4Q6PDQ2 Gm24990-201ENSMUST00000157406 323 ntBASIC17.18■□□□□ 0.34
Chd4Q6PDQ2 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd4Q6PDQ2 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chd4Q6PDQ2 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC17.18■□□□□ 0.34
Chd4Q6PDQ2 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd4Q6PDQ2 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd4Q6PDQ2 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd4Q6PDQ2 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chd4Q6PDQ2 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd4Q6PDQ2 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd4Q6PDQ2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd4Q6PDQ2 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Chd4Q6PDQ2 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd4Q6PDQ2 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd4Q6PDQ2 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd4Q6PDQ2 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chd4Q6PDQ2 Gm14028-201ENSMUST00000117434 479 ntBASIC17.17■□□□□ 0.34
Chd4Q6PDQ2 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd4Q6PDQ2 Gm2546-201ENSMUST00000182630 991 ntBASIC17.17■□□□□ 0.34
Chd4Q6PDQ2 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC17.17■□□□□ 0.34
Chd4Q6PDQ2 Gm2260-201ENSMUST00000184965 657 ntBASIC17.17■□□□□ 0.34
Chd4Q6PDQ2 Gm3786-201ENSMUST00000202659 378 ntBASIC17.17■□□□□ 0.34
Chd4Q6PDQ2 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC17.17■□□□□ 0.34
Chd4Q6PDQ2 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd4Q6PDQ2 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd4Q6PDQ2 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd4Q6PDQ2 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd4Q6PDQ2 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd4Q6PDQ2 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd4Q6PDQ2 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd4Q6PDQ2 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Chd4Q6PDQ2 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms