Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Sp140Q6NSQ5 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 Gm22189-201ENSMUST00000103822 86 ntBASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 Gm5279-201ENSMUST00000199575 745 ntBASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 Gm20949-201ENSMUST00000206478 952 ntBASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 Gm17330-201ENSMUST00000221047 165 ntBASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.64□□□□□ -0.23
Sp140Q6NSQ5 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sp140Q6NSQ5 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.63□□□□□ -0.23
Sp140Q6NSQ5 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sp140Q6NSQ5 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sp140Q6NSQ5 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Sp140Q6NSQ5 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sp140Q6NSQ5 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.63□□□□□ -0.23
Sp140Q6NSQ5 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sp140Q6NSQ5 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sp140Q6NSQ5 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sp140Q6NSQ5 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sp140Q6NSQ5 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sp140Q6NSQ5 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sp140Q6NSQ5 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Sp140Q6NSQ5 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sp140Q6NSQ5 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sp140Q6NSQ5 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sp140Q6NSQ5 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.63□□□□□ -0.23
Sp140Q6NSQ5 Gm12485-201ENSMUST00000119641 291 ntBASIC13.63□□□□□ -0.23
Sp140Q6NSQ5 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sp140Q6NSQ5 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sp140Q6NSQ5 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sp140Q6NSQ5 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sp140Q6NSQ5 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.63□□□□□ -0.23
Sp140Q6NSQ5 Gm18041-201ENSMUST00000218210 618 ntBASIC13.63□□□□□ -0.23
Sp140Q6NSQ5 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.63□□□□□ -0.23
Sp140Q6NSQ5 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.63□□□□□ -0.23
Sp140Q6NSQ5 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sp140Q6NSQ5 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sp140Q6NSQ5 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sp140Q6NSQ5 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sp140Q6NSQ5 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sp140Q6NSQ5 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Sp140Q6NSQ5 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sp140Q6NSQ5 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sp140Q6NSQ5 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sp140Q6NSQ5 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Sp140Q6NSQ5 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sp140Q6NSQ5 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sp140Q6NSQ5 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sp140Q6NSQ5 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sp140Q6NSQ5 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sp140Q6NSQ5 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sp140Q6NSQ5 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sp140Q6NSQ5 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sp140Q6NSQ5 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
Sp140Q6NSQ5 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Sp140Q6NSQ5 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.62□□□□□ -0.23
Sp140Q6NSQ5 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sp140Q6NSQ5 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sp140Q6NSQ5 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sp140Q6NSQ5 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.62□□□□□ -0.23
Sp140Q6NSQ5 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Sp140Q6NSQ5 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Sp140Q6NSQ5 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.62□□□□□ -0.23
Sp140Q6NSQ5 Gm28760-201ENSMUST00000185995 736 ntBASIC13.62□□□□□ -0.23
Sp140Q6NSQ5 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.62□□□□□ -0.23
Sp140Q6NSQ5 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Sp140Q6NSQ5 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms