Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
AtmQ62388 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
AtmQ62388 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
AtmQ62388 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AtmQ62388 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
AtmQ62388 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
AtmQ62388 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
AtmQ62388 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AtmQ62388 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
AtmQ62388 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AtmQ62388 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
AtmQ62388 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
AtmQ62388 Gm11801-201ENSMUST00000117807 746 ntBASIC12.4□□□□□ -0.42
AtmQ62388 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
AtmQ62388 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
AtmQ62388 Gm17040-202ENSMUST00000170597 889 ntBASIC12.4□□□□□ -0.42
AtmQ62388 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.4□□□□□ -0.42
AtmQ62388 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AtmQ62388 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
AtmQ62388 Gm44651-201ENSMUST00000207343 372 ntBASIC12.4□□□□□ -0.42
AtmQ62388 AC154176.1-201ENSMUST00000225897 220 ntBASIC12.4□□□□□ -0.42
AtmQ62388 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AtmQ62388 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AtmQ62388 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AtmQ62388 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
AtmQ62388 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
AtmQ62388 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
AtmQ62388 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AtmQ62388 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.4□□□□□ -0.42
AtmQ62388 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
AtmQ62388 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.4□□□□□ -0.42
AtmQ62388 Gm8894-201ENSMUST00000074642 666 ntBASIC12.4□□□□□ -0.42
AtmQ62388 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.4□□□□□ -0.42
AtmQ62388 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.4□□□□□ -0.42
AtmQ62388 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AtmQ62388 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AtmQ62388 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
AtmQ62388 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
AtmQ62388 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.39□□□□□ -0.43
AtmQ62388 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AtmQ62388 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
AtmQ62388 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
AtmQ62388 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AtmQ62388 Gm13875-201ENSMUST00000120162 282 ntBASIC12.39□□□□□ -0.43
AtmQ62388 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AtmQ62388 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.39□□□□□ -0.43
AtmQ62388 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.39□□□□□ -0.43
AtmQ62388 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
AtmQ62388 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.39□□□□□ -0.43
AtmQ62388 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
AtmQ62388 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AtmQ62388 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
AtmQ62388 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AtmQ62388 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
AtmQ62388 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AtmQ62388 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
AtmQ62388 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.39□□□□□ -0.43
AtmQ62388 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
AtmQ62388 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AtmQ62388 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.39□□□□□ -0.43
AtmQ62388 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.39□□□□□ -0.43
AtmQ62388 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AtmQ62388 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
AtmQ62388 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.39□□□□□ -0.43
AtmQ62388 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AtmQ62388 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AtmQ62388 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AtmQ62388 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.39□□□□□ -0.43
AtmQ62388 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
AtmQ62388 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
AtmQ62388 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
AtmQ62388 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
AtmQ62388 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.39□□□□□ -0.43
AtmQ62388 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.39□□□□□ -0.43
AtmQ62388 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC12.39□□□□□ -0.43
AtmQ62388 Rprl1-202ENSMUST00000198476 238 ntBASIC12.39□□□□□ -0.43
AtmQ62388 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.39□□□□□ -0.43
AtmQ62388 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC12.38□□□□□ -0.43
AtmQ62388 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.38□□□□□ -0.43
AtmQ62388 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AtmQ62388 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AtmQ62388 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
AtmQ62388 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.38□□□□□ -0.43
AtmQ62388 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
AtmQ62388 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.38□□□□□ -0.43
AtmQ62388 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
AtmQ62388 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
AtmQ62388 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC12.38□□□□□ -0.43
AtmQ62388 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.38□□□□□ -0.43
AtmQ62388 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.38□□□□□ -0.43
AtmQ62388 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AtmQ62388 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.38□□□□□ -0.43
AtmQ62388 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
AtmQ62388 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
AtmQ62388 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AtmQ62388 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AtmQ62388 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
AtmQ62388 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.38□□□□□ -0.43
AtmQ62388 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
AtmQ62388 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms