Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Foxc1Q61572 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Foxc1Q61572 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Foxc1Q61572 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Foxc1Q61572 Gm15393-201ENSMUST00000120499 219 ntBASIC10.04□□□□□ -0.8
Foxc1Q61572 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC10.04□□□□□ -0.8
Foxc1Q61572 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC10.04□□□□□ -0.8
Foxc1Q61572 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC10.04□□□□□ -0.8
Foxc1Q61572 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC10.04□□□□□ -0.8
Foxc1Q61572 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC10.04□□□□□ -0.8
Foxc1Q61572 Gm18660-201ENSMUST00000199542 629 ntBASIC10.04□□□□□ -0.8
Foxc1Q61572 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC10.04□□□□□ -0.8
Foxc1Q61572 AC153529.1-201ENSMUST00000217818 370 ntBASIC10.04□□□□□ -0.8
Foxc1Q61572 AC238811.1-201ENSMUST00000225302 441 ntBASIC10.04□□□□□ -0.8
Foxc1Q61572 AC139350.3-201ENSMUST00000226151 420 ntBASIC10.04□□□□□ -0.8
Foxc1Q61572 AC154806.6-201ENSMUST00000228192 202 ntBASIC10.04□□□□□ -0.8
Foxc1Q61572 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Foxc1Q61572 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Foxc1Q61572 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Foxc1Q61572 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Foxc1Q61572 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Foxc1Q61572 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Foxc1Q61572 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Foxc1Q61572 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Foxc1Q61572 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Foxc1Q61572 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Foxc1Q61572 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Foxc1Q61572 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Foxc1Q61572 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Foxc1Q61572 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Foxc1Q61572 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Foxc1Q61572 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.04□□□□□ -0.8
Foxc1Q61572 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Foxc1Q61572 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Foxc1Q61572 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Foxc1Q61572 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Foxc1Q61572 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Foxc1Q61572 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Foxc1Q61572 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Foxc1Q61572 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Foxc1Q61572 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Foxc1Q61572 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Foxc1Q61572 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Foxc1Q61572 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Foxc1Q61572 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Foxc1Q61572 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Foxc1Q61572 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Foxc1Q61572 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Foxc1Q61572 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Foxc1Q61572 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Foxc1Q61572 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Foxc1Q61572 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Foxc1Q61572 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC10.03□□□□□ -0.8
Foxc1Q61572 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Foxc1Q61572 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Foxc1Q61572 Gm12585-201ENSMUST00000117307 290 ntBASIC10.03□□□□□ -0.8
Foxc1Q61572 Gm14127-201ENSMUST00000117906 678 ntBASIC10.03□□□□□ -0.8
Foxc1Q61572 Gm15460-201ENSMUST00000118147 391 ntBASIC10.03□□□□□ -0.8
Foxc1Q61572 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC10.03□□□□□ -0.8
Foxc1Q61572 Gm13658-201ENSMUST00000135329 929 ntTSL 5 BASIC10.03□□□□□ -0.8
Foxc1Q61572 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC10.03□□□□□ -0.8
Foxc1Q61572 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Foxc1Q61572 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Foxc1Q61572 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC10.03□□□□□ -0.8
Foxc1Q61572 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Foxc1Q61572 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Foxc1Q61572 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Foxc1Q61572 Gm27216-202ENSMUST00000184100 635 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Foxc1Q61572 2810404M03Rik-201ENSMUST00000188324 1245 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Foxc1Q61572 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Foxc1Q61572 Gm45701-201ENSMUST00000212049 235 ntBASIC10.03□□□□□ -0.8
Foxc1Q61572 Gm5425-201ENSMUST00000214125 459 ntBASIC10.03□□□□□ -0.8
Foxc1Q61572 Gm7653-201ENSMUST00000214567 508 ntBASIC10.03□□□□□ -0.8
Foxc1Q61572 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC10.03□□□□□ -0.8
Foxc1Q61572 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Foxc1Q61572 CT010480.1-201ENSMUST00000223612 363 ntBASIC10.03□□□□□ -0.8
Foxc1Q61572 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC10.03□□□□□ -0.8
Foxc1Q61572 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Foxc1Q61572 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Foxc1Q61572 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Foxc1Q61572 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Foxc1Q61572 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Foxc1Q61572 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC10.03□□□□□ -0.8
Foxc1Q61572 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Foxc1Q61572 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Foxc1Q61572 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Foxc1Q61572 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Foxc1Q61572 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Foxc1Q61572 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Foxc1Q61572 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Foxc1Q61572 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Foxc1Q61572 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Foxc1Q61572 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Foxc1Q61572 Gm45667-201ENSMUST00000210380 1316 ntBASIC10.03□□□□□ -0.8
Foxc1Q61572 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Foxc1Q61572 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Foxc1Q61572 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Foxc1Q61572 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Foxc1Q61572 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Foxc1Q61572 AC166574.6-201ENSMUST00000227889 1806 ntBASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms