Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Gm14350-201ENSMUST00000116642 640 ntBASIC13.97□□□□□ -0.17
Smarcd1Q61466 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Gm24644-201ENSMUST00000157114 139 ntBASIC13.97□□□□□ -0.17
Smarcd1Q61466 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd1Q61466 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Gm29649-201ENSMUST00000185649 419 ntBASIC13.97□□□□□ -0.17
Smarcd1Q61466 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.97□□□□□ -0.17
Smarcd1Q61466 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.97□□□□□ -0.17
Smarcd1Q61466 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.97□□□□□ -0.17
Smarcd1Q61466 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.97□□□□□ -0.17
Smarcd1Q61466 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Gm25857-201ENSMUST00000082788 129 ntBASIC13.97□□□□□ -0.17
Smarcd1Q61466 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.97□□□□□ -0.17
Smarcd1Q61466 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd1Q61466 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Smarcd1Q61466 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcd1Q61466 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcd1Q61466 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcd1Q61466 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcd1Q61466 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.96□□□□□ -0.17
Smarcd1Q61466 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcd1Q61466 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Smarcd1Q61466 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Smarcd1Q61466 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcd1Q61466 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcd1Q61466 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.96□□□□□ -0.17
Smarcd1Q61466 Gm6447-201ENSMUST00000118905 835 ntBASIC13.96□□□□□ -0.17
Smarcd1Q61466 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Smarcd1Q61466 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.96□□□□□ -0.17
Smarcd1Q61466 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcd1Q61466 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcd1Q61466 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Smarcd1Q61466 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcd1Q61466 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smarcd1Q61466 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smarcd1Q61466 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smarcd1Q61466 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smarcd1Q61466 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Smarcd1Q61466 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd1Q61466 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Smarcd1Q61466 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd1Q61466 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd1Q61466 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd1Q61466 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd1Q61466 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Smarcd1Q61466 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Smarcd1Q61466 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd1Q61466 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd1Q61466 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.95□□□□□ -0.18
Smarcd1Q61466 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd1Q61466 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd1Q61466 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.95□□□□□ -0.18
Smarcd1Q61466 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd1Q61466 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd1Q61466 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.95□□□□□ -0.18
Smarcd1Q61466 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Smarcd1Q61466 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd1Q61466 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.95□□□□□ -0.18
Smarcd1Q61466 Gm18062-201ENSMUST00000208020 547 ntBASIC13.95□□□□□ -0.18
Smarcd1Q61466 Gm18055-201ENSMUST00000208254 547 ntBASIC13.95□□□□□ -0.18
Smarcd1Q61466 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd1Q61466 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd1Q61466 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.95□□□□□ -0.18
Smarcd1Q61466 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.95□□□□□ -0.18
Smarcd1Q61466 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd1Q61466 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms