Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Usf1Q61069 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usf1Q61069 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.19□□□□□ -0.46
Usf1Q61069 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usf1Q61069 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.19□□□□□ -0.46
Usf1Q61069 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.19□□□□□ -0.46
Usf1Q61069 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usf1Q61069 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.19□□□□□ -0.46
Usf1Q61069 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.19□□□□□ -0.46
Usf1Q61069 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usf1Q61069 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Usf1Q61069 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Usf1Q61069 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usf1Q61069 Gm18584-201ENSMUST00000203098 964 ntBASIC12.19□□□□□ -0.46
Usf1Q61069 Gm4768-201ENSMUST00000206199 686 ntBASIC12.19□□□□□ -0.46
Usf1Q61069 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.19□□□□□ -0.46
Usf1Q61069 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usf1Q61069 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usf1Q61069 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Usf1Q61069 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.19□□□□□ -0.46
Usf1Q61069 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usf1Q61069 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usf1Q61069 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usf1Q61069 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usf1Q61069 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usf1Q61069 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usf1Q61069 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usf1Q61069 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usf1Q61069 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usf1Q61069 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usf1Q61069 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
Usf1Q61069 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.18□□□□□ -0.46
Usf1Q61069 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf1Q61069 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf1Q61069 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf1Q61069 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf1Q61069 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usf1Q61069 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf1Q61069 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf1Q61069 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usf1Q61069 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf1Q61069 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usf1Q61069 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf1Q61069 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf1Q61069 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf1Q61069 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Usf1Q61069 Gm10434-201ENSMUST00000101158 471 ntBASIC12.18□□□□□ -0.46
Usf1Q61069 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.18□□□□□ -0.46
Usf1Q61069 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.18□□□□□ -0.46
Usf1Q61069 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.18□□□□□ -0.46
Usf1Q61069 Gm22902-201ENSMUST00000158488 302 ntBASIC12.18□□□□□ -0.46
Usf1Q61069 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.18□□□□□ -0.46
Usf1Q61069 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.18□□□□□ -0.46
Usf1Q61069 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.18□□□□□ -0.46
Usf1Q61069 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf1Q61069 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usf1Q61069 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.18□□□□□ -0.46
Usf1Q61069 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Usf1Q61069 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.18□□□□□ -0.46
Usf1Q61069 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.18□□□□□ -0.46
Usf1Q61069 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf1Q61069 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf1Q61069 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf1Q61069 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf1Q61069 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf1Q61069 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usf1Q61069 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf1Q61069 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf1Q61069 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usf1Q61069 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.18□□□□□ -0.46
Usf1Q61069 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf1Q61069 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Usf1Q61069 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Usf1Q61069 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf1Q61069 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf1Q61069 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf1Q61069 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Usf1Q61069 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Usf1Q61069 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usf1Q61069 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf1Q61069 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf1Q61069 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usf1Q61069 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Usf1Q61069 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf1Q61069 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf1Q61069 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf1Q61069 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf1Q61069 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf1Q61069 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf1Q61069 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf1Q61069 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf1Q61069 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf1Q61069 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf1Q61069 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Usf1Q61069 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usf1Q61069 Gm6447-201ENSMUST00000118905 835 ntBASIC12.17□□□□□ -0.46
Usf1Q61069 Gm12176-201ENSMUST00000121420 875 ntBASIC12.17□□□□□ -0.46
Usf1Q61069 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.17□□□□□ -0.46
Usf1Q61069 Gm24548-201ENSMUST00000158650 108 ntBASIC12.17□□□□□ -0.46
Usf1Q61069 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms