Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Xrcc1Q60596 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Xrcc1Q60596 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Xrcc1Q60596 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Xrcc1Q60596 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Xrcc1Q60596 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Xrcc1Q60596 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Xrcc1Q60596 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Xrcc1Q60596 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Xrcc1Q60596 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Xrcc1Q60596 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Xrcc1Q60596 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Xrcc1Q60596 Gm15806-201ENSMUST00000120696 955 ntBASIC12.84□□□□□ -0.35
Xrcc1Q60596 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Xrcc1Q60596 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.84□□□□□ -0.35
Xrcc1Q60596 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Xrcc1Q60596 Gm9002-201ENSMUST00000178437 499 ntBASIC12.84□□□□□ -0.35
Xrcc1Q60596 Gm29608-201ENSMUST00000190444 463 ntBASIC12.84□□□□□ -0.35
Xrcc1Q60596 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.84□□□□□ -0.35
Xrcc1Q60596 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.84□□□□□ -0.35
Xrcc1Q60596 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Xrcc1Q60596 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Xrcc1Q60596 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Xrcc1Q60596 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.84□□□□□ -0.35
Xrcc1Q60596 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Xrcc1Q60596 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Xrcc1Q60596 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.84□□□□□ -0.35
Xrcc1Q60596 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Xrcc1Q60596 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Xrcc1Q60596 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Xrcc1Q60596 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Xrcc1Q60596 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Xrcc1Q60596 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Xrcc1Q60596 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Xrcc1Q60596 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Xrcc1Q60596 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Xrcc1Q60596 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Xrcc1Q60596 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Xrcc1Q60596 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Xrcc1Q60596 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
Xrcc1Q60596 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Xrcc1Q60596 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Xrcc1Q60596 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Xrcc1Q60596 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Xrcc1Q60596 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Xrcc1Q60596 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
Xrcc1Q60596 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.83□□□□□ -0.35
Xrcc1Q60596 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.83□□□□□ -0.36
Xrcc1Q60596 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Xrcc1Q60596 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Xrcc1Q60596 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Xrcc1Q60596 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Xrcc1Q60596 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Xrcc1Q60596 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Xrcc1Q60596 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.83□□□□□ -0.36
Xrcc1Q60596 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Xrcc1Q60596 Gm11478-201ENSMUST00000117851 599 ntBASIC12.83□□□□□ -0.36
Xrcc1Q60596 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.83□□□□□ -0.36
Xrcc1Q60596 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Xrcc1Q60596 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Xrcc1Q60596 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.83□□□□□ -0.36
Xrcc1Q60596 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Xrcc1Q60596 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Xrcc1Q60596 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Xrcc1Q60596 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Xrcc1Q60596 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Xrcc1Q60596 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Xrcc1Q60596 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Xrcc1Q60596 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Xrcc1Q60596 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Xrcc1Q60596 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Xrcc1Q60596 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Xrcc1Q60596 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Xrcc1Q60596 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.83□□□□□ -0.36
Xrcc1Q60596 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Xrcc1Q60596 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Xrcc1Q60596 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Xrcc1Q60596 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Xrcc1Q60596 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Xrcc1Q60596 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.83□□□□□ -0.36
Xrcc1Q60596 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Xrcc1Q60596 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Xrcc1Q60596 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Xrcc1Q60596 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Xrcc1Q60596 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.83□□□□□ -0.36
Xrcc1Q60596 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Xrcc1Q60596 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Xrcc1Q60596 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Xrcc1Q60596 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Xrcc1Q60596 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Xrcc1Q60596 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
Xrcc1Q60596 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Xrcc1Q60596 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.82□□□□□ -0.36
Xrcc1Q60596 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.82□□□□□ -0.36
Xrcc1Q60596 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.82□□□□□ -0.36
Xrcc1Q60596 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Xrcc1Q60596 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Xrcc1Q60596 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Xrcc1Q60596 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Xrcc1Q60596 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms