Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Mir8117-201ENSMUST00000184773 107 ntBASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 AC174742.1-201ENSMUST00000218272 304 ntBASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 AC131997.1-201ENSMUST00000228611 1229 ntBASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Psmb5-202ENSMUST00000227257 622 ntBASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms