Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Gm10339-203ENSMUST00000225409 1671 ntBASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rc3h1Q4VGL6 Gm45684-201ENSMUST00000210244 1571 ntBASIC15.49■□□□□ 0.07
Rc3h1Q4VGL6 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rc3h1Q4VGL6 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.49■□□□□ 0.07
Rc3h1Q4VGL6 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rc3h1Q4VGL6 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rc3h1Q4VGL6 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Rc3h1Q4VGL6 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Rc3h1Q4VGL6 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rc3h1Q4VGL6 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC15.49■□□□□ 0.07
Rc3h1Q4VGL6 Gm5187-201ENSMUST00000117317 991 ntBASIC15.49■□□□□ 0.07
Rc3h1Q4VGL6 Gm11618-201ENSMUST00000117946 267 ntBASIC15.49■□□□□ 0.07
Rc3h1Q4VGL6 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rc3h1Q4VGL6 Gm1335-201ENSMUST00000121653 386 ntBASIC15.49■□□□□ 0.07
Rc3h1Q4VGL6 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rc3h1Q4VGL6 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC15.49■□□□□ 0.07
Rc3h1Q4VGL6 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rc3h1Q4VGL6 Gm37922-201ENSMUST00000195596 455 ntBASIC15.49■□□□□ 0.07
Rc3h1Q4VGL6 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC15.49■□□□□ 0.07
Rc3h1Q4VGL6 Gm45841-201ENSMUST00000207700 164 ntBASIC15.49■□□□□ 0.07
Rc3h1Q4VGL6 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rc3h1Q4VGL6 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rc3h1Q4VGL6 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rc3h1Q4VGL6 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rc3h1Q4VGL6 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rc3h1Q4VGL6 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Rc3h1Q4VGL6 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Rc3h1Q4VGL6 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rc3h1Q4VGL6 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rc3h1Q4VGL6 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Tmed9-203ENSMUST00000224741 1450 ntBASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Gm2639-201ENSMUST00000156881 1297 ntBASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Gm7029-201ENSMUST00000173226 450 ntBASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Gm27514-201ENSMUST00000183692 110 ntBASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Gm44069-201ENSMUST00000204898 506 ntBASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 CT009738.1-201ENSMUST00000219031 809 ntBASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 AC173210.1-201ENSMUST00000222341 1131 ntBASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Gm10146-201ENSMUST00000072739 309 ntBASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rc3h1Q4VGL6 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC15.47■□□□□ 0.07
Rc3h1Q4VGL6 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
Rc3h1Q4VGL6 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rc3h1Q4VGL6 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rc3h1Q4VGL6 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rc3h1Q4VGL6 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rc3h1Q4VGL6 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rc3h1Q4VGL6 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Rc3h1Q4VGL6 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rc3h1Q4VGL6 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rc3h1Q4VGL6 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Rc3h1Q4VGL6 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC15.47■□□□□ 0.07
Rc3h1Q4VGL6 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rc3h1Q4VGL6 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms