Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC16.3■□□□□ 0.2
Shank3Q4ACU6 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC16.3■□□□□ 0.2
Shank3Q4ACU6 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shank3Q4ACU6 Gm21451-201ENSMUST00000111062 2775 ntBASIC16.3■□□□□ 0.2
Shank3Q4ACU6 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Shank3Q4ACU6 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shank3Q4ACU6 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Shank3Q4ACU6 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shank3Q4ACU6 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shank3Q4ACU6 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shank3Q4ACU6 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC16.29■□□□□ 0.2
Shank3Q4ACU6 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shank3Q4ACU6 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shank3Q4ACU6 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Shank3Q4ACU6 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shank3Q4ACU6 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shank3Q4ACU6 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shank3Q4ACU6 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC16.29■□□□□ 0.2
Shank3Q4ACU6 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC16.29■□□□□ 0.2
Shank3Q4ACU6 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC16.29■□□□□ 0.2
Shank3Q4ACU6 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC16.29■□□□□ 0.2
Shank3Q4ACU6 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC16.29■□□□□ 0.2
Shank3Q4ACU6 Gm44651-201ENSMUST00000207343 372 ntBASIC16.29■□□□□ 0.2
Shank3Q4ACU6 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC16.29■□□□□ 0.2
Shank3Q4ACU6 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shank3Q4ACU6 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shank3Q4ACU6 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Shank3Q4ACU6 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shank3Q4ACU6 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shank3Q4ACU6 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shank3Q4ACU6 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Shank3Q4ACU6 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Shank3Q4ACU6 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Shank3Q4ACU6 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shank3Q4ACU6 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shank3Q4ACU6 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Shank3Q4ACU6 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shank3Q4ACU6 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shank3Q4ACU6 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shank3Q4ACU6 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Shank3Q4ACU6 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC16.28■□□□□ 0.2
Shank3Q4ACU6 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Shank3Q4ACU6 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Shank3Q4ACU6 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shank3Q4ACU6 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC16.28■□□□□ 0.2
Shank3Q4ACU6 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
Shank3Q4ACU6 Gm17812-201ENSMUST00000204935 318 ntBASIC16.28■□□□□ 0.2
Shank3Q4ACU6 Gm45219-201ENSMUST00000205602 465 ntBASIC16.28■□□□□ 0.2
Shank3Q4ACU6 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Shank3Q4ACU6 Spcs1-203ENSMUST00000226374 592 ntBASIC16.28■□□□□ 0.2
Shank3Q4ACU6 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shank3Q4ACU6 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shank3Q4ACU6 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Shank3Q4ACU6 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Shank3Q4ACU6 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC16.28■□□□□ 0.2
Shank3Q4ACU6 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shank3Q4ACU6 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shank3Q4ACU6 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shank3Q4ACU6 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shank3Q4ACU6 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shank3Q4ACU6 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shank3Q4ACU6 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shank3Q4ACU6 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Shank3Q4ACU6 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Shank3Q4ACU6 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shank3Q4ACU6 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC16.28■□□□□ 0.2
Shank3Q4ACU6 Gm9211-201ENSMUST00000182882 975 ntBASIC16.28■□□□□ 0.2
Shank3Q4ACU6 Gm19353-201ENSMUST00000184561 445 ntBASIC16.28■□□□□ 0.2
Shank3Q4ACU6 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC16.28■□□□□ 0.2
Shank3Q4ACU6 Gm19931-201ENSMUST00000198920 368 ntBASIC16.28■□□□□ 0.2
Shank3Q4ACU6 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shank3Q4ACU6 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shank3Q4ACU6 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Shank3Q4ACU6 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Shank3Q4ACU6 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
Shank3Q4ACU6 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shank3Q4ACU6 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Shank3Q4ACU6 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Shank3Q4ACU6 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shank3Q4ACU6 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shank3Q4ACU6 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shank3Q4ACU6 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Shank3Q4ACU6 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shank3Q4ACU6 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Shank3Q4ACU6 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC16.27■□□□□ 0.2
Shank3Q4ACU6 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shank3Q4ACU6 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Shank3Q4ACU6 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Shank3Q4ACU6 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Shank3Q4ACU6 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shank3Q4ACU6 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shank3Q4ACU6 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Shank3Q4ACU6 Gm13408-201ENSMUST00000119822 798 ntBASIC16.27■□□□□ 0.19
Shank3Q4ACU6 Gm13935-201ENSMUST00000121859 798 ntBASIC16.27■□□□□ 0.19
Shank3Q4ACU6 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC16.27■□□□□ 0.19
Shank3Q4ACU6 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC16.27■□□□□ 0.19
Shank3Q4ACU6 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shank3Q4ACU6 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC16.27■□□□□ 0.19
Shank3Q4ACU6 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
Shank3Q4ACU6 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms