Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC17.15■□□□□ 0.34
Ccdc27Q3V036 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc27Q3V036 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Ccdc27Q3V036 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc27Q3V036 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc27Q3V036 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ccdc27Q3V036 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc27Q3V036 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc27Q3V036 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc27Q3V036 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC17.14■□□□□ 0.33
Ccdc27Q3V036 Gm25144-201ENSMUST00000179561 110 ntBASIC17.14■□□□□ 0.33
Ccdc27Q3V036 Gm25352-201ENSMUST00000179815 110 ntBASIC17.14■□□□□ 0.33
Ccdc27Q3V036 Gm27430-201ENSMUST00000184585 107 ntBASIC17.14■□□□□ 0.33
Ccdc27Q3V036 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.14■□□□□ 0.33
Ccdc27Q3V036 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC17.14■□□□□ 0.33
Ccdc27Q3V036 Gm44333-201ENSMUST00000197168 107 ntBASIC17.14■□□□□ 0.33
Ccdc27Q3V036 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Ccdc27Q3V036 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.14■□□□□ 0.33
Ccdc27Q3V036 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc27Q3V036 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.14■□□□□ 0.33
Ccdc27Q3V036 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.14■□□□□ 0.33
Ccdc27Q3V036 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Ccdc27Q3V036 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ccdc27Q3V036 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc27Q3V036 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc27Q3V036 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC17.14■□□□□ 0.33
Ccdc27Q3V036 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc27Q3V036 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc27Q3V036 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc27Q3V036 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc27Q3V036 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc27Q3V036 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc27Q3V036 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Ccdc27Q3V036 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ccdc27Q3V036 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc27Q3V036 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ccdc27Q3V036 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc27Q3V036 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc27Q3V036 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Ccdc27Q3V036 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc27Q3V036 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc27Q3V036 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc27Q3V036 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ccdc27Q3V036 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc27Q3V036 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc27Q3V036 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc27Q3V036 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Ccdc27Q3V036 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc27Q3V036 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc27Q3V036 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Ccdc27Q3V036 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Ccdc27Q3V036 Gm25948-201ENSMUST00000175334 112 ntBASIC17.13■□□□□ 0.33
Ccdc27Q3V036 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.13■□□□□ 0.33
Ccdc27Q3V036 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc27Q3V036 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc27Q3V036 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.13■□□□□ 0.33
Ccdc27Q3V036 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc27Q3V036 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc27Q3V036 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc27Q3V036 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc27Q3V036 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.13■□□□□ 0.33
Ccdc27Q3V036 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc27Q3V036 AC159196.2-201ENSMUST00000224082 1622 ntBASIC17.13■□□□□ 0.33
Ccdc27Q3V036 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ccdc27Q3V036 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ccdc27Q3V036 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc27Q3V036 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc27Q3V036 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc27Q3V036 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc27Q3V036 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc27Q3V036 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Ccdc27Q3V036 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc27Q3V036 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC17.12■□□□□ 0.33
Ccdc27Q3V036 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc27Q3V036 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc27Q3V036 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc27Q3V036 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC17.12■□□□□ 0.33
Ccdc27Q3V036 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc27Q3V036 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc27Q3V036 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc27Q3V036 Gm15460-201ENSMUST00000118147 391 ntBASIC17.12■□□□□ 0.33
Ccdc27Q3V036 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc27Q3V036 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.12■□□□□ 0.33
Ccdc27Q3V036 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC17.12■□□□□ 0.33
Ccdc27Q3V036 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.12■□□□□ 0.33
Ccdc27Q3V036 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc27Q3V036 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc27Q3V036 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc27Q3V036 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ccdc27Q3V036 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc27Q3V036 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc27Q3V036 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc27Q3V036 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc27Q3V036 Gm28386-201ENSMUST00000189147 1849 ntBASIC17.12■□□□□ 0.33
Ccdc27Q3V036 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc27Q3V036 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC17.12■□□□□ 0.33
Ccdc27Q3V036 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc27Q3V036 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc27Q3V036 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc27Q3V036 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms