Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Spg11Q3UHA3 Gm37246-201ENSMUST00000192665 835 ntBASIC12.26□□□□□ -0.45
Spg11Q3UHA3 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC12.26□□□□□ -0.45
Spg11Q3UHA3 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.26□□□□□ -0.45
Spg11Q3UHA3 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Spg11Q3UHA3 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Gm6630-201ENSMUST00000119199 454 ntBASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC12.25□□□□□ -0.45
Spg11Q3UHA3 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Gm17208-201ENSMUST00000168388 535 ntBASIC12.25□□□□□ -0.45
Spg11Q3UHA3 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Gm9139-201ENSMUST00000218817 700 ntBASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Gm10312-201ENSMUST00000078515 489 ntBASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.25□□□□□ -0.45
Spg11Q3UHA3 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Gm11941-201ENSMUST00000119904 610 ntBASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.25□□□□□ -0.45
Spg11Q3UHA3 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Spg11Q3UHA3 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Spg11Q3UHA3 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Spg11Q3UHA3 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Spg11Q3UHA3 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Spg11Q3UHA3 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Spg11Q3UHA3 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Spg11Q3UHA3 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.24□□□□□ -0.45
Spg11Q3UHA3 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.24□□□□□ -0.45
Spg11Q3UHA3 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Spg11Q3UHA3 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Spg11Q3UHA3 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Spg11Q3UHA3 Gm19091-201ENSMUST00000208120 978 ntBASIC12.24□□□□□ -0.45
Spg11Q3UHA3 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.24□□□□□ -0.45
Spg11Q3UHA3 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.24□□□□□ -0.45
Spg11Q3UHA3 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Spg11Q3UHA3 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Spg11Q3UHA3 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Spg11Q3UHA3 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Spg11Q3UHA3 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.24□□□□□ -0.45
Spg11Q3UHA3 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Spg11Q3UHA3 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Spg11Q3UHA3 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Spg11Q3UHA3 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Spg11Q3UHA3 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Spg11Q3UHA3 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Spg11Q3UHA3 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Spg11Q3UHA3 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Spg11Q3UHA3 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.23□□□□□ -0.45
Spg11Q3UHA3 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms