Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brf2Q3UAW9 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Gm12485-201ENSMUST00000119641 291 ntBASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.66□□□□□ -0.38
Brf2Q3UAW9 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Brf2Q3UAW9 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brf2Q3UAW9 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Brf2Q3UAW9 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Brf2Q3UAW9 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Brf2Q3UAW9 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Brf2Q3UAW9 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Brf2Q3UAW9 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Brf2Q3UAW9 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Brf2Q3UAW9 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Brf2Q3UAW9 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Brf2Q3UAW9 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.65□□□□□ -0.38
Brf2Q3UAW9 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Brf2Q3UAW9 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Brf2Q3UAW9 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.65□□□□□ -0.38
Brf2Q3UAW9 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Brf2Q3UAW9 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Brf2Q3UAW9 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Brf2Q3UAW9 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Brf2Q3UAW9 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Brf2Q3UAW9 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Brf2Q3UAW9 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.65□□□□□ -0.38
Brf2Q3UAW9 Gm5279-201ENSMUST00000199575 745 ntBASIC12.65□□□□□ -0.38
Brf2Q3UAW9 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.65□□□□□ -0.38
Brf2Q3UAW9 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.65□□□□□ -0.38
Brf2Q3UAW9 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.65□□□□□ -0.38
Brf2Q3UAW9 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Brf2Q3UAW9 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Brf2Q3UAW9 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Brf2Q3UAW9 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Brf2Q3UAW9 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Brf2Q3UAW9 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Brf2Q3UAW9 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Brf2Q3UAW9 Grk6-205ENSMUST00000224653 2976 ntBASIC12.65□□□□□ -0.38
Brf2Q3UAW9 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Brf2Q3UAW9 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Brf2Q3UAW9 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Brf2Q3UAW9 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Brf2Q3UAW9 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Brf2Q3UAW9 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Brf2Q3UAW9 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Brf2Q3UAW9 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Brf2Q3UAW9 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Brf2Q3UAW9 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Brf2Q3UAW9 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Brf2Q3UAW9 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Brf2Q3UAW9 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Brf2Q3UAW9 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.64□□□□□ -0.39
Brf2Q3UAW9 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Brf2Q3UAW9 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Brf2Q3UAW9 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.64□□□□□ -0.39
Brf2Q3UAW9 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.64□□□□□ -0.39
Brf2Q3UAW9 Gm14057-201ENSMUST00000120631 482 ntBASIC12.64□□□□□ -0.39
Brf2Q3UAW9 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.64□□□□□ -0.39
Brf2Q3UAW9 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.64□□□□□ -0.39
Brf2Q3UAW9 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Brf2Q3UAW9 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Brf2Q3UAW9 Gm28760-201ENSMUST00000185995 736 ntBASIC12.64□□□□□ -0.39
Brf2Q3UAW9 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.64□□□□□ -0.39
Brf2Q3UAW9 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.64□□□□□ -0.39
Brf2Q3UAW9 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms