Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhej1Q3KNJ2 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhej1Q3KNJ2 Gm11594-201ENSMUST00000122313 162 ntBASIC14.34□□□□□ -0.11
Nhej1Q3KNJ2 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.34□□□□□ -0.11
Nhej1Q3KNJ2 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Nhej1Q3KNJ2 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nhej1Q3KNJ2 Gm3436-201ENSMUST00000179930 840 ntBASIC14.34□□□□□ -0.11
Nhej1Q3KNJ2 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhej1Q3KNJ2 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nhej1Q3KNJ2 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhej1Q3KNJ2 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhej1Q3KNJ2 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nhej1Q3KNJ2 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nhej1Q3KNJ2 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nhej1Q3KNJ2 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhej1Q3KNJ2 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhej1Q3KNJ2 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhej1Q3KNJ2 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhej1Q3KNJ2 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhej1Q3KNJ2 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
Nhej1Q3KNJ2 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nhej1Q3KNJ2 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nhej1Q3KNJ2 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nhej1Q3KNJ2 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nhej1Q3KNJ2 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.33□□□□□ -0.11
Nhej1Q3KNJ2 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.33□□□□□ -0.11
Nhej1Q3KNJ2 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.33□□□□□ -0.11
Nhej1Q3KNJ2 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nhej1Q3KNJ2 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nhej1Q3KNJ2 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nhej1Q3KNJ2 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nhej1Q3KNJ2 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Nhej1Q3KNJ2 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nhej1Q3KNJ2 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nhej1Q3KNJ2 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nhej1Q3KNJ2 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.33□□□□□ -0.12
Nhej1Q3KNJ2 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.33□□□□□ -0.12
Nhej1Q3KNJ2 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.33□□□□□ -0.12
Nhej1Q3KNJ2 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nhej1Q3KNJ2 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nhej1Q3KNJ2 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Nhej1Q3KNJ2 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nhej1Q3KNJ2 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nhej1Q3KNJ2 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nhej1Q3KNJ2 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Nhej1Q3KNJ2 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nhej1Q3KNJ2 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.33□□□□□ -0.12
Nhej1Q3KNJ2 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nhej1Q3KNJ2 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nhej1Q3KNJ2 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Nhej1Q3KNJ2 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nhej1Q3KNJ2 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nhej1Q3KNJ2 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Nhej1Q3KNJ2 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Nhej1Q3KNJ2 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nhej1Q3KNJ2 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Nhej1Q3KNJ2 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nhej1Q3KNJ2 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhej1Q3KNJ2 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhej1Q3KNJ2 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Nhej1Q3KNJ2 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nhej1Q3KNJ2 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.32□□□□□ -0.12
Nhej1Q3KNJ2 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhej1Q3KNJ2 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Nhej1Q3KNJ2 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhej1Q3KNJ2 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Nhej1Q3KNJ2 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhej1Q3KNJ2 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nhej1Q3KNJ2 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.32□□□□□ -0.12
Nhej1Q3KNJ2 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.32□□□□□ -0.12
Nhej1Q3KNJ2 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhej1Q3KNJ2 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Nhej1Q3KNJ2 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhej1Q3KNJ2 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nhej1Q3KNJ2 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhej1Q3KNJ2 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhej1Q3KNJ2 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Nhej1Q3KNJ2 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nhej1Q3KNJ2 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhej1Q3KNJ2 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Nhej1Q3KNJ2 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhej1Q3KNJ2 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhej1Q3KNJ2 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nhej1Q3KNJ2 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhej1Q3KNJ2 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhej1Q3KNJ2 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhej1Q3KNJ2 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nhej1Q3KNJ2 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhej1Q3KNJ2 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
Nhej1Q3KNJ2 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Nhej1Q3KNJ2 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhej1Q3KNJ2 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nhej1Q3KNJ2 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhej1Q3KNJ2 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nhej1Q3KNJ2 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.31□□□□□ -0.12
Nhej1Q3KNJ2 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhej1Q3KNJ2 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nhej1Q3KNJ2 Gm2756-201ENSMUST00000195851 400 ntBASIC14.31□□□□□ -0.12
Nhej1Q3KNJ2 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.31□□□□□ -0.12
Nhej1Q3KNJ2 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms