Protein–RNA interactions for Protein: Q1W617

Shroom4, Protein Shroom4, mousemouse

Predictions only

Length 1,475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom4Q1W617 Gm22902-201ENSMUST00000158488 302 ntBASIC20.84■□□□□ 0.93
Shroom4Q1W617 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC20.84■□□□□ 0.93
Shroom4Q1W617 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC20.84■□□□□ 0.93
Shroom4Q1W617 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Shroom4Q1W617 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC20.84■□□□□ 0.93
Shroom4Q1W617 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC20.84■□□□□ 0.93
Shroom4Q1W617 AC123665.1-201ENSMUST00000228204 438 ntBASIC20.84■□□□□ 0.93
Shroom4Q1W617 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Shroom4Q1W617 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shroom4Q1W617 Gm10702-201ENSMUST00000098929 1268 ntBASIC20.84■□□□□ 0.93
Shroom4Q1W617 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shroom4Q1W617 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shroom4Q1W617 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Shroom4Q1W617 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shroom4Q1W617 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
Shroom4Q1W617 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shroom4Q1W617 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Shroom4Q1W617 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Shroom4Q1W617 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shroom4Q1W617 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
Shroom4Q1W617 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Shroom4Q1W617 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Shroom4Q1W617 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
Shroom4Q1W617 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Shroom4Q1W617 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
Shroom4Q1W617 Gm8913-201ENSMUST00000209491 641 ntBASIC20.83■□□□□ 0.93
Shroom4Q1W617 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC20.83■□□□□ 0.93
Shroom4Q1W617 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Shroom4Q1W617 AC167013.1-201ENSMUST00000228592 202 ntBASIC20.83■□□□□ 0.93
Shroom4Q1W617 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Shroom4Q1W617 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Shroom4Q1W617 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Shroom4Q1W617 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Shroom4Q1W617 Gm6992-201ENSMUST00000217973 1607 ntBASIC20.83■□□□□ 0.92
Shroom4Q1W617 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Shroom4Q1W617 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Shroom4Q1W617 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Shroom4Q1W617 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Shroom4Q1W617 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Shroom4Q1W617 Gm43908-201ENSMUST00000205074 1472 ntBASIC20.82■□□□□ 0.92
Shroom4Q1W617 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
Shroom4Q1W617 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Shroom4Q1W617 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shroom4Q1W617 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Shroom4Q1W617 Gm26361-201ENSMUST00000158868 186 ntBASIC20.82■□□□□ 0.92
Shroom4Q1W617 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC20.82■□□□□ 0.92
Shroom4Q1W617 Gm6652-201ENSMUST00000186414 1070 ntBASIC20.82■□□□□ 0.92
Shroom4Q1W617 Gm28450-201ENSMUST00000187349 638 ntBASIC20.82■□□□□ 0.92
Shroom4Q1W617 Gm19208-201ENSMUST00000213861 912 ntBASIC20.82■□□□□ 0.92
Shroom4Q1W617 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Shroom4Q1W617 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shroom4Q1W617 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shroom4Q1W617 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shroom4Q1W617 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Shroom4Q1W617 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shroom4Q1W617 Gm14752-201ENSMUST00000120719 2075 ntBASIC20.82■□□□□ 0.92
Shroom4Q1W617 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Shroom4Q1W617 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Shroom4Q1W617 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shroom4Q1W617 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shroom4Q1W617 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shroom4Q1W617 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shroom4Q1W617 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shroom4Q1W617 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shroom4Q1W617 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shroom4Q1W617 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shroom4Q1W617 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Shroom4Q1W617 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Shroom4Q1W617 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shroom4Q1W617 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
Shroom4Q1W617 Gm14832-201ENSMUST00000121289 322 ntBASIC20.81■□□□□ 0.92
Shroom4Q1W617 Gm19931-201ENSMUST00000198920 368 ntBASIC20.81■□□□□ 0.92
Shroom4Q1W617 Gm39404-201ENSMUST00000216350 313 ntBASIC20.81■□□□□ 0.92
Shroom4Q1W617 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC20.81■□□□□ 0.92
Shroom4Q1W617 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shroom4Q1W617 Gm8385-201ENSMUST00000058999 643 ntBASIC20.81■□□□□ 0.92
Shroom4Q1W617 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shroom4Q1W617 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shroom4Q1W617 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Shroom4Q1W617 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Shroom4Q1W617 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Shroom4Q1W617 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC20.81■□□□□ 0.92
Shroom4Q1W617 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shroom4Q1W617 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Shroom4Q1W617 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shroom4Q1W617 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shroom4Q1W617 AC167013.2-201ENSMUST00000228520 2684 ntBASIC20.81■□□□□ 0.92
Shroom4Q1W617 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC20.81■□□□□ 0.92
Shroom4Q1W617 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shroom4Q1W617 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC20.81■□□□□ 0.92
Shroom4Q1W617 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Shroom4Q1W617 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shroom4Q1W617 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shroom4Q1W617 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC20.81■□□□□ 0.92
Shroom4Q1W617 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shroom4Q1W617 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Shroom4Q1W617 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Shroom4Q1W617 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC20.81■□□□□ 0.92
Shroom4Q1W617 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Shroom4Q1W617 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms