Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 BC001981-202ENSMUST00000191393 1545 ntBASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ptchd3Q0EEE2 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ptchd3Q0EEE2 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ptchd3Q0EEE2 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ptchd3Q0EEE2 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ptchd3Q0EEE2 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ptchd3Q0EEE2 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ptchd3Q0EEE2 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ptchd3Q0EEE2 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ptchd3Q0EEE2 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ptchd3Q0EEE2 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Ptchd3Q0EEE2 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ptchd3Q0EEE2 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ptchd3Q0EEE2 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ptchd3Q0EEE2 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.97□□□□□ -0.33
Ptchd3Q0EEE2 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.97□□□□□ -0.33
Ptchd3Q0EEE2 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.97□□□□□ -0.33
Ptchd3Q0EEE2 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.97□□□□□ -0.33
Ptchd3Q0EEE2 Gm29741-201ENSMUST00000192667 421 ntBASIC12.97□□□□□ -0.33
Ptchd3Q0EEE2 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Ptchd3Q0EEE2 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.97□□□□□ -0.33
Ptchd3Q0EEE2 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ptchd3Q0EEE2 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ptchd3Q0EEE2 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ptchd3Q0EEE2 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ptchd3Q0EEE2 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ptchd3Q0EEE2 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ptchd3Q0EEE2 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ptchd3Q0EEE2 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ptchd3Q0EEE2 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ptchd3Q0EEE2 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ptchd3Q0EEE2 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ptchd3Q0EEE2 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.97□□□□□ -0.33
Ptchd3Q0EEE2 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ptchd3Q0EEE2 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.97□□□□□ -0.33
Ptchd3Q0EEE2 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ptchd3Q0EEE2 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ptchd3Q0EEE2 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ptchd3Q0EEE2 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ptchd3Q0EEE2 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ptchd3Q0EEE2 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.96□□□□□ -0.33
Ptchd3Q0EEE2 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ptchd3Q0EEE2 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.96□□□□□ -0.33
Ptchd3Q0EEE2 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ptchd3Q0EEE2 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.96□□□□□ -0.33
Ptchd3Q0EEE2 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ptchd3Q0EEE2 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ptchd3Q0EEE2 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Ptchd3Q0EEE2 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ptchd3Q0EEE2 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ptchd3Q0EEE2 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ptchd3Q0EEE2 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ptchd3Q0EEE2 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
Ptchd3Q0EEE2 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Ptchd3Q0EEE2 Gm24543-201ENSMUST00000103867 82 ntBASIC12.96□□□□□ -0.33
Ptchd3Q0EEE2 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ptchd3Q0EEE2 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Ptchd3Q0EEE2 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.96□□□□□ -0.33
Ptchd3Q0EEE2 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms