Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cntn3Q07409 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cntn3Q07409 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cntn3Q07409 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cntn3Q07409 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cntn3Q07409 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cntn3Q07409 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cntn3Q07409 Gm38144-201ENSMUST00000192790 465 ntBASIC14.06□□□□□ -0.16
Cntn3Q07409 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cntn3Q07409 Gm9396-201ENSMUST00000076703 567 ntBASIC14.06□□□□□ -0.16
Cntn3Q07409 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cntn3Q07409 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cntn3Q07409 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cntn3Q07409 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cntn3Q07409 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cntn3Q07409 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cntn3Q07409 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cntn3Q07409 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cntn3Q07409 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cntn3Q07409 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cntn3Q07409 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cntn3Q07409 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cntn3Q07409 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cntn3Q07409 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.06□□□□□ -0.16
Cntn3Q07409 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cntn3Q07409 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cntn3Q07409 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cntn3Q07409 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cntn3Q07409 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cntn3Q07409 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.05□□□□□ -0.16
Cntn3Q07409 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cntn3Q07409 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cntn3Q07409 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cntn3Q07409 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cntn3Q07409 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cntn3Q07409 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cntn3Q07409 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cntn3Q07409 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cntn3Q07409 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cntn3Q07409 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cntn3Q07409 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cntn3Q07409 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cntn3Q07409 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Cntn3Q07409 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cntn3Q07409 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.05□□□□□ -0.16
Cntn3Q07409 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.05□□□□□ -0.16
Cntn3Q07409 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.05□□□□□ -0.16
Cntn3Q07409 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.05□□□□□ -0.16
Cntn3Q07409 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.05□□□□□ -0.16
Cntn3Q07409 Gm12403-201ENSMUST00000121384 959 ntBASIC14.05□□□□□ -0.16
Cntn3Q07409 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.05□□□□□ -0.16
Cntn3Q07409 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.05□□□□□ -0.16
Cntn3Q07409 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.05□□□□□ -0.16
Cntn3Q07409 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.05□□□□□ -0.16
Cntn3Q07409 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.05□□□□□ -0.16
Cntn3Q07409 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.05□□□□□ -0.16
Cntn3Q07409 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.05□□□□□ -0.16
Cntn3Q07409 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.05□□□□□ -0.16
Cntn3Q07409 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cntn3Q07409 Gm18041-201ENSMUST00000218210 618 ntBASIC14.05□□□□□ -0.16
Cntn3Q07409 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.05□□□□□ -0.16
Cntn3Q07409 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cntn3Q07409 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cntn3Q07409 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cntn3Q07409 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cntn3Q07409 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cntn3Q07409 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cntn3Q07409 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cntn3Q07409 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cntn3Q07409 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cntn3Q07409 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cntn3Q07409 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.05□□□□□ -0.16
Cntn3Q07409 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cntn3Q07409 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cntn3Q07409 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cntn3Q07409 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cntn3Q07409 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cntn3Q07409 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cntn3Q07409 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cntn3Q07409 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cntn3Q07409 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cntn3Q07409 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.04□□□□□ -0.16
Cntn3Q07409 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.04□□□□□ -0.16
Cntn3Q07409 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cntn3Q07409 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cntn3Q07409 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cntn3Q07409 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cntn3Q07409 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
Cntn3Q07409 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cntn3Q07409 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cntn3Q07409 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.04□□□□□ -0.16
Cntn3Q07409 Gm6152-201ENSMUST00000151704 340 ntBASIC14.04□□□□□ -0.16
Cntn3Q07409 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.04□□□□□ -0.16
Cntn3Q07409 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cntn3Q07409 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.04□□□□□ -0.16
Cntn3Q07409 Gm24196-201ENSMUST00000179161 110 ntBASIC14.04□□□□□ -0.16
Cntn3Q07409 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cntn3Q07409 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cntn3Q07409 Gm27847-201ENSMUST00000183711 107 ntBASIC14.04□□□□□ -0.16
Cntn3Q07409 Gm27375-201ENSMUST00000183799 107 ntBASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms