Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hspg2Q05793 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hspg2Q05793 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hspg2Q05793 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hspg2Q05793 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hspg2Q05793 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Hspg2Q05793 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Hspg2Q05793 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC9.61□□□□□ -0.87
Hspg2Q05793 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC9.61□□□□□ -0.87
Hspg2Q05793 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Hspg2Q05793 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC9.61□□□□□ -0.87
Hspg2Q05793 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hspg2Q05793 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hspg2Q05793 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hspg2Q05793 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Hspg2Q05793 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Hspg2Q05793 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC9.61□□□□□ -0.87
Hspg2Q05793 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hspg2Q05793 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Hspg2Q05793 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hspg2Q05793 Gm25880-201ENSMUST00000104331 132 ntBASIC9.6□□□□□ -0.87
Hspg2Q05793 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC9.6□□□□□ -0.87
Hspg2Q05793 Gm44772-201ENSMUST00000207623 1191 ntBASIC9.6□□□□□ -0.87
Hspg2Q05793 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Hspg2Q05793 Mir219a-1-201ENSMUST00000083621 110 ntBASIC9.6□□□□□ -0.87
Hspg2Q05793 Gm10179-201ENSMUST00000086233 688 ntBASIC9.6□□□□□ -0.87
Hspg2Q05793 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hspg2Q05793 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hspg2Q05793 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hspg2Q05793 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hspg2Q05793 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hspg2Q05793 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hspg2Q05793 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Hspg2Q05793 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hspg2Q05793 Gm26361-201ENSMUST00000158868 186 ntBASIC9.6□□□□□ -0.87
Hspg2Q05793 Gm26956-201ENSMUST00000182176 986 ntBASIC9.6□□□□□ -0.87
Hspg2Q05793 Gm37737-201ENSMUST00000195013 1638 ntBASIC9.6□□□□□ -0.87
Hspg2Q05793 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hspg2Q05793 Gm44405-201ENSMUST00000198952 126 ntBASIC9.6□□□□□ -0.87
Hspg2Q05793 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC9.6□□□□□ -0.87
Hspg2Q05793 Gm4366-201ENSMUST00000201488 1342 ntBASIC9.6□□□□□ -0.87
Hspg2Q05793 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hspg2Q05793 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Hspg2Q05793 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hspg2Q05793 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hspg2Q05793 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hspg2Q05793 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hspg2Q05793 Sorbs3-204ENSMUST00000227929 2460 ntBASIC9.6□□□□□ -0.87
Hspg2Q05793 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hspg2Q05793 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hspg2Q05793 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Hspg2Q05793 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Hspg2Q05793 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hspg2Q05793 Gm25951-201ENSMUST00000175330 64 ntBASIC9.6□□□□□ -0.87
Hspg2Q05793 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC9.6□□□□□ -0.87
Hspg2Q05793 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC9.6□□□□□ -0.87
Hspg2Q05793 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC9.6□□□□□ -0.87
Hspg2Q05793 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC9.6□□□□□ -0.87
Hspg2Q05793 Gm43399-201ENSMUST00000202546 2374 ntBASIC9.6□□□□□ -0.87
Hspg2Q05793 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hspg2Q05793 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hspg2Q05793 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hspg2Q05793 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hspg2Q05793 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC9.6□□□□□ -0.87
Hspg2Q05793 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hspg2Q05793 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Hspg2Q05793 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC9.59□□□□□ -0.87
Hspg2Q05793 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hspg2Q05793 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Hspg2Q05793 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC9.59□□□□□ -0.87
Hspg2Q05793 Gm2445-201ENSMUST00000182798 989 ntBASIC9.59□□□□□ -0.87
Hspg2Q05793 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC9.59□□□□□ -0.87
Hspg2Q05793 Gm42779-201ENSMUST00000198807 406 ntBASIC9.59□□□□□ -0.87
Hspg2Q05793 Gm45433-201ENSMUST00000209386 247 ntBASIC9.59□□□□□ -0.87
Hspg2Q05793 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hspg2Q05793 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hspg2Q05793 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC9.59□□□□□ -0.87
Hspg2Q05793 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC9.59□□□□□ -0.87
Hspg2Q05793 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hspg2Q05793 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hspg2Q05793 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC9.59□□□□□ -0.87
Hspg2Q05793 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC9.59□□□□□ -0.87
Hspg2Q05793 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hspg2Q05793 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Hspg2Q05793 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hspg2Q05793 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hspg2Q05793 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hspg2Q05793 Gm10710-201ENSMUST00000047876 3971 ntBASIC9.59□□□□□ -0.87
Hspg2Q05793 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Hspg2Q05793 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hspg2Q05793 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC9.59□□□□□ -0.87
Hspg2Q05793 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hspg2Q05793 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hspg2Q05793 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC9.59□□□□□ -0.87
Hspg2Q05793 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hspg2Q05793 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hspg2Q05793 Gm13996-201ENSMUST00000118456 430 ntBASIC9.59□□□□□ -0.87
Hspg2Q05793 Gm25545-201ENSMUST00000122673 323 ntBASIC9.59□□□□□ -0.87
Hspg2Q05793 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hspg2Q05793 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms