Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col10a1Q05306 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col10a1Q05306 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col10a1Q05306 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col10a1Q05306 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col10a1Q05306 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col10a1Q05306 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.4□□□□□ -0.42
Col10a1Q05306 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.4□□□□□ -0.42
Col10a1Q05306 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.4□□□□□ -0.42
Col10a1Q05306 Gm7063-201ENSMUST00000186840 981 ntBASIC12.4□□□□□ -0.42
Col10a1Q05306 Gm8515-201ENSMUST00000194852 576 ntBASIC12.4□□□□□ -0.42
Col10a1Q05306 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col10a1Q05306 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.4□□□□□ -0.42
Col10a1Q05306 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Col10a1Q05306 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col10a1Q05306 Gm6180-201ENSMUST00000065243 498 ntBASIC12.4□□□□□ -0.42
Col10a1Q05306 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col10a1Q05306 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col10a1Q05306 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col10a1Q05306 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Col10a1Q05306 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col10a1Q05306 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col10a1Q05306 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col10a1Q05306 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col10a1Q05306 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.4□□□□□ -0.42
Col10a1Q05306 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Col10a1Q05306 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.4□□□□□ -0.42
Col10a1Q05306 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col10a1Q05306 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col10a1Q05306 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col10a1Q05306 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col10a1Q05306 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col10a1Q05306 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col10a1Q05306 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col10a1Q05306 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Col10a1Q05306 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Col10a1Q05306 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.4□□□□□ -0.43
Col10a1Q05306 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col10a1Q05306 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col10a1Q05306 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col10a1Q05306 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col10a1Q05306 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col10a1Q05306 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col10a1Q05306 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col10a1Q05306 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col10a1Q05306 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col10a1Q05306 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col10a1Q05306 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col10a1Q05306 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col10a1Q05306 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col10a1Q05306 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col10a1Q05306 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col10a1Q05306 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.39□□□□□ -0.43
Col10a1Q05306 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Col10a1Q05306 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.39□□□□□ -0.43
Col10a1Q05306 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.39□□□□□ -0.43
Col10a1Q05306 Gm6745-201ENSMUST00000199216 526 ntBASIC12.39□□□□□ -0.43
Col10a1Q05306 Gm42550-201ENSMUST00000201553 960 ntBASIC12.39□□□□□ -0.43
Col10a1Q05306 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col10a1Q05306 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col10a1Q05306 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.39□□□□□ -0.43
Col10a1Q05306 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.39□□□□□ -0.43
Col10a1Q05306 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col10a1Q05306 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col10a1Q05306 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Col10a1Q05306 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col10a1Q05306 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col10a1Q05306 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col10a1Q05306 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.39□□□□□ -0.43
Col10a1Q05306 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Col10a1Q05306 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col10a1Q05306 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col10a1Q05306 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col10a1Q05306 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col10a1Q05306 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Col10a1Q05306 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col10a1Q05306 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col10a1Q05306 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col10a1Q05306 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Col10a1Q05306 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col10a1Q05306 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col10a1Q05306 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col10a1Q05306 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col10a1Q05306 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.38□□□□□ -0.43
Col10a1Q05306 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col10a1Q05306 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Col10a1Q05306 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Col10a1Q05306 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
Col10a1Q05306 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col10a1Q05306 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.38□□□□□ -0.43
Col10a1Q05306 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col10a1Q05306 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.38□□□□□ -0.43
Col10a1Q05306 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col10a1Q05306 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col10a1Q05306 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col10a1Q05306 Gm15678-201ENSMUST00000117573 960 ntBASIC12.38□□□□□ -0.43
Col10a1Q05306 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col10a1Q05306 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.38□□□□□ -0.43
Col10a1Q05306 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.38□□□□□ -0.43
Col10a1Q05306 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms