Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx3-2P97503 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx3-2P97503 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx3-2P97503 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx3-2P97503 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx3-2P97503 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx3-2P97503 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx3-2P97503 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx3-2P97503 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx3-2P97503 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.72□□□□□ -0.37
Nkx3-2P97503 Gm11814-201ENSMUST00000119515 929 ntBASIC12.72□□□□□ -0.37
Nkx3-2P97503 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.72□□□□□ -0.37
Nkx3-2P97503 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.72□□□□□ -0.37
Nkx3-2P97503 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.72□□□□□ -0.37
Nkx3-2P97503 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx3-2P97503 Gm38223-201ENSMUST00000194484 695 ntBASIC12.72□□□□□ -0.37
Nkx3-2P97503 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.72□□□□□ -0.37
Nkx3-2P97503 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx3-2P97503 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.72□□□□□ -0.37
Nkx3-2P97503 Gm18062-201ENSMUST00000208020 547 ntBASIC12.72□□□□□ -0.37
Nkx3-2P97503 Gm18055-201ENSMUST00000208254 547 ntBASIC12.72□□□□□ -0.37
Nkx3-2P97503 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx3-2P97503 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx3-2P97503 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx3-2P97503 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx3-2P97503 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx3-2P97503 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx3-2P97503 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Nkx3-2P97503 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Nkx3-2P97503 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx3-2P97503 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx3-2P97503 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx3-2P97503 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Nkx3-2P97503 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Nkx3-2P97503 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx3-2P97503 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx3-2P97503 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Nkx3-2P97503 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx3-2P97503 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Nkx3-2P97503 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx3-2P97503 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.71□□□□□ -0.37
Nkx3-2P97503 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx3-2P97503 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx3-2P97503 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx3-2P97503 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Nkx3-2P97503 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.71□□□□□ -0.37
Nkx3-2P97503 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx3-2P97503 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.71□□□□□ -0.37
Nkx3-2P97503 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx3-2P97503 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx3-2P97503 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx3-2P97503 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx3-2P97503 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.71□□□□□ -0.37
Nkx3-2P97503 Gm12928-201ENSMUST00000117115 573 ntBASIC12.71□□□□□ -0.37
Nkx3-2P97503 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx3-2P97503 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Nkx3-2P97503 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx3-2P97503 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx3-2P97503 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx3-2P97503 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.71□□□□□ -0.37
Nkx3-2P97503 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx3-2P97503 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx3-2P97503 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx3-2P97503 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx3-2P97503 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx3-2P97503 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx3-2P97503 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx3-2P97503 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx3-2P97503 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx3-2P97503 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx3-2P97503 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx3-2P97503 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx3-2P97503 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx3-2P97503 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx3-2P97503 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx3-2P97503 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx3-2P97503 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.7□□□□□ -0.38
Nkx3-2P97503 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
Nkx3-2P97503 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Nkx3-2P97503 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx3-2P97503 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx3-2P97503 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx3-2P97503 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx3-2P97503 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx3-2P97503 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx3-2P97503 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx3-2P97503 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.7□□□□□ -0.38
Nkx3-2P97503 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.7□□□□□ -0.38
Nkx3-2P97503 Gm2445-201ENSMUST00000182798 989 ntBASIC12.7□□□□□ -0.38
Nkx3-2P97503 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.7□□□□□ -0.38
Nkx3-2P97503 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx3-2P97503 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx3-2P97503 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx3-2P97503 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Nkx3-2P97503 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Nkx3-2P97503 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx3-2P97503 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Nkx3-2P97503 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx3-2P97503 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx3-2P97503 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms