Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcc1P97496 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcc1P97496 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcc1P97496 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Smarcc1P97496 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcc1P97496 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcc1P97496 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcc1P97496 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.74■□□□□ 0.27
Smarcc1P97496 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcc1P97496 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC16.74■□□□□ 0.27
Smarcc1P97496 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcc1P97496 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcc1P97496 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Smarcc1P97496 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
Smarcc1P97496 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcc1P97496 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC16.74■□□□□ 0.27
Smarcc1P97496 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcc1P97496 AC122305.4-201ENSMUST00000216159 1206 ntBASIC16.74■□□□□ 0.27
Smarcc1P97496 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Smarcc1P97496 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Smarcc1P97496 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Smarcc1P97496 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Smarcc1P97496 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC16.74■□□□□ 0.27
Smarcc1P97496 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC16.74■□□□□ 0.27
Smarcc1P97496 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Smarcc1P97496 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcc1P97496 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcc1P97496 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.74■□□□□ 0.27
Smarcc1P97496 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcc1P97496 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC16.74■□□□□ 0.27
Smarcc1P97496 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcc1P97496 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Smarcc1P97496 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcc1P97496 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Smarcc1P97496 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Smarcc1P97496 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcc1P97496 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcc1P97496 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Smarcc1P97496 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcc1P97496 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Smarcc1P97496 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Smarcc1P97496 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC16.73■□□□□ 0.27
Smarcc1P97496 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcc1P97496 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Smarcc1P97496 Gm28693-202ENSMUST00000190758 331 ntBASIC16.73■□□□□ 0.27
Smarcc1P97496 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC16.73■□□□□ 0.27
Smarcc1P97496 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC16.73■□□□□ 0.27
Smarcc1P97496 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcc1P97496 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcc1P97496 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcc1P97496 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Smarcc1P97496 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcc1P97496 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcc1P97496 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Smarcc1P97496 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcc1P97496 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcc1P97496 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.73■□□□□ 0.27
Smarcc1P97496 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC16.73■□□□□ 0.27
Smarcc1P97496 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcc1P97496 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Smarcc1P97496 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Smarcc1P97496 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcc1P97496 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcc1P97496 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcc1P97496 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcc1P97496 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcc1P97496 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcc1P97496 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcc1P97496 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcc1P97496 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcc1P97496 Gm10434-201ENSMUST00000101158 471 ntBASIC16.72■□□□□ 0.27
Smarcc1P97496 Gm24830-201ENSMUST00000102024 166 ntBASIC16.72■□□□□ 0.27
Smarcc1P97496 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcc1P97496 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcc1P97496 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC16.72■□□□□ 0.27
Smarcc1P97496 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcc1P97496 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcc1P97496 Gm13316-201ENSMUST00000140537 691 ntBASIC16.72■□□□□ 0.27
Smarcc1P97496 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcc1P97496 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC16.72■□□□□ 0.27
Smarcc1P97496 Gm24990-201ENSMUST00000157406 323 ntBASIC16.72■□□□□ 0.27
Smarcc1P97496 Gm8738-201ENSMUST00000172606 329 ntBASIC16.72■□□□□ 0.27
Smarcc1P97496 Gm25890-201ENSMUST00000177643 165 ntBASIC16.72■□□□□ 0.27
Smarcc1P97496 Rnu1b2-201ENSMUST00000178073 165 ntBASIC16.72■□□□□ 0.27
Smarcc1P97496 Rnu1b1-201ENSMUST00000178250 165 ntBASIC16.72■□□□□ 0.27
Smarcc1P97496 Gm22614-201ENSMUST00000178300 165 ntBASIC16.72■□□□□ 0.27
Smarcc1P97496 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC16.72■□□□□ 0.27
Smarcc1P97496 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC16.72■□□□□ 0.27
Smarcc1P97496 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcc1P97496 Gm30285-201ENSMUST00000214614 422 ntBASIC16.72■□□□□ 0.27
Smarcc1P97496 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Smarcc1P97496 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcc1P97496 Gm22042-201ENSMUST00000082989 165 ntBASIC16.72■□□□□ 0.27
Smarcc1P97496 Gm26232-201ENSMUST00000083360 166 ntBASIC16.72■□□□□ 0.27
Smarcc1P97496 Gm24136-201ENSMUST00000083374 165 ntBASIC16.72■□□□□ 0.27
Smarcc1P97496 Rnu1b6-201ENSMUST00000083839 166 ntBASIC16.72■□□□□ 0.27
Smarcc1P97496 Gm26110-201ENSMUST00000083971 165 ntBASIC16.72■□□□□ 0.27
Smarcc1P97496 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcc1P97496 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcc1P97496 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms